RNA–Protein interactions for RNA: ENST00000541341.5

CHFR-219, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-219ENST00000541341 OR6K3Q8NGY3 331 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 OR5K2Q8NHB8 316 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 FANK1Q8TC84 345 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 CNOT9Q92600 299 aaKnown RBP9.54□□□□□ -0.88
CHFR-219ENST00000541341 HIST1H2ACQ93077 130 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 PNPLA2Q96AD5 504 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 SMIM19Q96E16 107 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 FAM46AQ96IP4 442 aaKnown RBP9.54□□□□□ -0.88
CHFR-219ENST00000541341 ABHD1Q96SE0 405 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 ZNF559Q9BR84 538 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 DPH1Q9BZG8 443 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 SLCO5A1Q9H2Y9 848 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 GLIPR2Q9H4G4 154 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 NOX3Q9HBY0 568 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 NTMQ9P121 344 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 MGAT4CQ9UBM8 478 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 NDRG3Q9UGV2 375 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 ZNF107Q9UII5 783 aaPredicted RBP9.54□□□□□ -0.88
CHFR-219ENST00000541341 KCNK7Q9Y2U2 307 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 MED31Q9Y3C7 131 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 COL12A1Q99715 3063 aa9.54□□□□□ -0.88
CHFR-219ENST00000541341 LOC105369274A0A096LPK9 316 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 PRSS38A1L453 326 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 URADA6NGE7 173 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 PRR19A6NJB7 356 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 CDRT15L2A8MXV6 281 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 MCRIP1C9JLW8 97 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 ATP6V1G2-DDX39BF2Z307 99 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 FAM227AF5H4B4 570 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 H7BY64 318 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 H7C2Y5 167 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 TRIM77I1YAP6 450 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 K7ENP7 123 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 SAP18O00422 153 aaKnown RBP9.53□□□□□ -0.88
CHFR-219ENST00000541341 EFSO43281 561 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 RAD1O60671 282 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 SEMA7AO75326 666 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 PPM1BO75688 479 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 POP7O75817 140 aaKnown RBP9.53□□□□□ -0.88
CHFR-219ENST00000541341 KLHL18O94889 574 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 GBAP04062 536 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 HMGN2P05204 90 aaKnown RBP9.53□□□□□ -0.88
CHFR-219ENST00000541341 IGFBP1P08833 259 aaPredicted RBP9.53□□□□□ -0.88
CHFR-219ENST00000541341 SBK2P0C263 348 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 CTSEP14091 401 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 PRKACAP17612 351 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 NT5EP21589 574 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 SHC1P29353 583 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 TLX1P31314 330 aaPredicted RBP9.53□□□□□ -0.88
CHFR-219ENST00000541341 CTSCP53634 463 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 IL10RAQ13651 578 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 ZNF273Q14593 569 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 ZNF169Q14929 603 aaPredicted RBP9.53□□□□□ -0.88
CHFR-219ENST00000541341 HEPHL1Q6MZM0 1159 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 SLC30A6Q6NXT4 461 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 TMEM81Q6P7N7 255 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 INO80CQ6PI98 192 aaPredicted RBP9.53□□□□□ -0.88
CHFR-219ENST00000541341 ENPP7Q6UWV6 458 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 UNQ9370/PRO34162Q6UXP9 181 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 GSG1LQ6UXU4 331 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 SZRD1Q7Z422 152 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 BCDIN3DQ7Z5W3 292 aaKnown RBP9.53□□□□□ -0.88
CHFR-219ENST00000541341 C11orf96Q7Z7L8 435 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 AMZ2Q86W34 360 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 RBM45Q8IUH3 476 aaKnown RBP9.53□□□□□ -0.88
CHFR-219ENST00000541341 ZNF547Q8IVP9 402 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 OR4N4Q8N0Y3 316 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 ARL14Q8N4G2 192 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 EXD3Q8N9H8 876 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 CLRN3Q8NCR9 226 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 BVESQ8NE79 360 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 OR4D11Q8NGI4 311 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 OR8D4Q8NGM9 314 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 THAP4Q8WY91 577 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 TFGQ92734 400 aaPredicted RBP9.53□□□□□ -0.88
CHFR-219ENST00000541341 EXTL1Q92935 676 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 ZFP3Q96NJ6 502 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 MS4A4EQ96PG1 132 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 TEAD3Q99594 435 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 DPH7Q9BTV6 452 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 SARGQ9BW04 601 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 PLA2G12AQ9BZM1 189 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 OR2AG1Q9H205 316 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 OR52D1Q9H346 318 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 TMEM27Q9HBJ8 222 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 FGF22Q9HCT0 170 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 SLC17A5Q9NRA2 495 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 TEX10Q9NXF1 929 aaPredicted RBP9.53□□□□□ -0.88
CHFR-219ENST00000541341 PISDQ9UG56 409 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 ING1Q9UK53 422 aaPredicted RBP9.53□□□□□ -0.88
CHFR-219ENST00000541341 GPR52Q9Y2T5 361 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 PRELID3BQ9Y3B1 194 aa9.53□□□□□ -0.88
CHFR-219ENST00000541341 NINQ8N4C6 2090 aa9.52□□□□□ -0.88
CHFR-219ENST00000541341 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 CCDC187A0A096LP49 1063 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 A0A1W2PQM1 296 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 ANKRD20A5PA0PJZ0 165 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 SMLR1H3BR10 107 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 SULT1C2O00338 296 aa9.52□□□□□ -0.89
CHFR-219ENST00000541341 GALR3O60755 368 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms