RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 CLDND2Q8NHS1 167 aa23.09■■□□□ 1.29
CHFR-218ENST00000540963 OXGR1Q96P68 337 aa23.09■■□□□ 1.29
CHFR-218ENST00000540963 TPK1Q9H3S4 243 aa23.09■■□□□ 1.29
CHFR-218ENST00000540963 PNPOQ9NVS9 261 aa23.09■■□□□ 1.29
CHFR-218ENST00000540963 REV1Q9UBZ9 1251 aa23.09■■□□□ 1.29
CHFR-218ENST00000540963 MGAM2Q2M2H8 2515 aa23.09■■□□□ 1.29
CHFR-218ENST00000540963 MEGF8Q7Z7M0 2845 aa23.08■■□□□ 1.29
CHFR-218ENST00000540963 LYNX1G3V0Z9 82 aa23.08■■□□□ 1.29
CHFR-218ENST00000540963 LYNX1P0DP58 116 aa23.08■■□□□ 1.29
CHFR-218ENST00000540963 LBPP18428 481 aa23.08■■□□□ 1.29
CHFR-218ENST00000540963 SLC1A6P48664 564 aa23.08■■□□□ 1.29
CHFR-218ENST00000540963 TMEM33P57088 247 aa23.08■■□□□ 1.29
CHFR-218ENST00000540963 MRPS11P82912 194 aaKnown RBP23.08■■□□□ 1.29
CHFR-218ENST00000540963 CEACAM16Q2WEN9 425 aa23.08■■□□□ 1.29
CHFR-218ENST00000540963 CEP85LQ5SZL2 805 aa23.08■■□□□ 1.29
CHFR-218ENST00000540963 SHQ1Q6PI26 577 aaKnown RBP23.08■■□□□ 1.29
CHFR-218ENST00000540963 MDP1Q86V88 176 aa23.08■■□□□ 1.29
CHFR-218ENST00000540963 PIK3C3Q8NEB9 887 aa23.08■■□□□ 1.29
CHFR-218ENST00000540963 RDH5Q92781 318 aa23.08■■□□□ 1.29
CHFR-218ENST00000540963 GCDHQ92947 438 aaPredicted RBP23.08■■□□□ 1.29
CHFR-218ENST00000540963 ARMC7Q9H6L4 198 aa23.08■■□□□ 1.29
CHFR-218ENST00000540963 P2RX2Q9UBL9 471 aa23.08■■□□□ 1.29
CHFR-218ENST00000540963 ZNF503-AS2A6NEH8 195 aa23.07■■□□□ 1.28
CHFR-218ENST00000540963 ZNF99A8MXY4 864 aaPredicted RBP23.07■■□□□ 1.28
CHFR-218ENST00000540963 TRIM77I1YAP6 450 aa23.07■■□□□ 1.28
CHFR-218ENST00000540963 TM9SF1O15321 606 aa23.07■■□□□ 1.28
CHFR-218ENST00000540963 AKAP8O43823 692 aaKnown RBP23.07■■□□□ 1.28
CHFR-218ENST00000540963 KRT75O95678 551 aa23.07■■□□□ 1.28
CHFR-218ENST00000540963 GTF2E2P29084 291 aaKnown RBP23.07■■□□□ 1.28
CHFR-218ENST00000540963 RPL14P50914 215 aaKnown RBP23.07■■□□□ 1.28
CHFR-218ENST00000540963 WDR4P57081 412 aaKnown RBP23.07■■□□□ 1.28
CHFR-218ENST00000540963 HILS1P60008 231 aa23.07■■□□□ 1.28
CHFR-218ENST00000540963 LARS2Q15031 903 aaKnown RBP23.07■■□□□ 1.28
CHFR-218ENST00000540963 MAPK11Q15759 364 aa23.07■■□□□ 1.28
CHFR-218ENST00000540963 COX20Q5RI15 118 aa23.07■■□□□ 1.28
CHFR-218ENST00000540963 KRT80Q6KB66 452 aa23.07■■□□□ 1.28
CHFR-218ENST00000540963 ZNF621Q6ZSS3 439 aa23.07■■□□□ 1.28
CHFR-218ENST00000540963 VRK2Q86Y07 508 aa23.07■■□□□ 1.28
CHFR-218ENST00000540963 OR51F2Q8NH61 342 aa23.07■■□□□ 1.28
CHFR-218ENST00000540963 TEX37Q96LM6 180 aa23.07■■□□□ 1.28
CHFR-218ENST00000540963 JMJD8Q96S16 334 aa23.07■■□□□ 1.28
CHFR-218ENST00000540963 PTDSS2Q9BVG9 487 aa23.07■■□□□ 1.28
CHFR-218ENST00000540963 RBM4Q9BWF3 364 aaKnown RBP23.07■■□□□ 1.28
CHFR-218ENST00000540963 B3GNT2Q9NY97 397 aa23.07■■□□□ 1.28
CHFR-218ENST00000540963 B3GAT1Q9P2W7 334 aa23.07■■□□□ 1.28
CHFR-218ENST00000540963 PCDHB10Q9UN67 800 aa23.07■■□□□ 1.28
CHFR-218ENST00000540963 LOC102725191A0A1B0GVB3 256 aa23.06■■□□□ 1.28
CHFR-218ENST00000540963 SAGP10523 405 aaPredicted RBP23.06■■□□□ 1.28
CHFR-218ENST00000540963 NCF2P19878 526 aaPredicted RBP23.06■■□□□ 1.28
CHFR-218ENST00000540963 GLRXP35754 106 aa23.06■■□□□ 1.28
CHFR-218ENST00000540963 CRISP3P54108 245 aa23.06■■□□□ 1.28
CHFR-218ENST00000540963 OGFOD2Q6N063 350 aa23.06■■□□□ 1.28
CHFR-218ENST00000540963 C5orf46Q6UWT4 87 aa23.06■■□□□ 1.28
CHFR-218ENST00000540963 KDM8Q8N371 416 aa23.06■■□□□ 1.28
CHFR-218ENST00000540963 SLC35B4Q969S0 331 aa23.06■■□□□ 1.28
CHFR-218ENST00000540963 MRPL37Q9BZE1 423 aaKnown RBP23.06■■□□□ 1.28
CHFR-218ENST00000540963 ZNF232Q9UNY5 417 aa23.06■■□□□ 1.28
CHFR-218ENST00000540963 ZNF443Q9Y2A4 671 aaPredicted RBP23.06■■□□□ 1.28
CHFR-218ENST00000540963 TRAV20A0A0B4J274 112 aa23.05■■□□□ 1.28
CHFR-218ENST00000540963 OR2T1O43869 369 aa23.05■■□□□ 1.28
CHFR-218ENST00000540963 GSNP06396 782 aa23.05■■□□□ 1.28
CHFR-218ENST00000540963 LIMS1P48059 325 aa23.05■■□□□ 1.28
CHFR-218ENST00000540963 ARFIP2P53365 341 aa23.05■■□□□ 1.28
CHFR-218ENST00000540963 BST1Q10588 318 aa23.05■■□□□ 1.28
CHFR-218ENST00000540963 SLC25A36Q96CQ1 311 aa23.05■■□□□ 1.28
CHFR-218ENST00000540963 ZNF837Q96EG3 531 aaPredicted RBP23.05■■□□□ 1.28
CHFR-218ENST00000540963 LRRC37BQ96QE4 947 aa23.05■■□□□ 1.28
CHFR-218ENST00000540963 OR52E6Q96RD3 313 aa23.05■■□□□ 1.28
CHFR-218ENST00000540963 NUF2Q9BZD4 464 aa23.05■■□□□ 1.28
CHFR-218ENST00000540963 DENND2DQ9H6A0 471 aaPredicted RBP23.05■■□□□ 1.28
CHFR-218ENST00000540963 ALDOCP09972 364 aaKnown RBP23.04■■□□□ 1.28
CHFR-218ENST00000540963 GAAP10253 952 aa23.04■■□□□ 1.28
CHFR-218ENST00000540963 ZNF35P13682 527 aa23.04■■□□□ 1.28
CHFR-218ENST00000540963 PRG2P13727 222 aa23.04■■□□□ 1.28
CHFR-218ENST00000540963 CDKN2CP42773 168 aa23.04■■□□□ 1.28
CHFR-218ENST00000540963 CAPZA2P47755 286 aa23.04■■□□□ 1.28
CHFR-218ENST00000540963 RPS23P62266 143 aaKnown RBP23.04■■□□□ 1.28
CHFR-218ENST00000540963 EGR4Q05215 589 aa23.04■■□□□ 1.28
CHFR-218ENST00000540963 C1DQ13901 141 aaKnown RBP23.04■■□□□ 1.28
CHFR-218ENST00000540963 GSG1Q2KHT4 349 aa23.04■■□□□ 1.28
CHFR-218ENST00000540963 ZNF627Q7L945 461 aa23.04■■□□□ 1.28
CHFR-218ENST00000540963 TMEM123Q8N131 208 aa23.04■■□□□ 1.28
CHFR-218ENST00000540963 OR2M2Q96R28 347 aa23.04■■□□□ 1.28
CHFR-218ENST00000540963 SPATA9Q9BWV2 254 aa23.04■■□□□ 1.28
CHFR-218ENST00000540963 KCNK9Q9NPC2 374 aa23.04■■□□□ 1.28
CHFR-218ENST00000540963 AIM2O14862 343 aa23.03■■□□□ 1.28
CHFR-218ENST00000540963 HPXP02790 462 aa23.03■■□□□ 1.28
CHFR-218ENST00000540963 ANPEPP15144 967 aa23.03■■□□□ 1.28
CHFR-218ENST00000540963 RPS5P46782 204 aaKnown RBP23.03■■□□□ 1.28
CHFR-218ENST00000540963 STX3Q13277 289 aa23.03■■□□□ 1.28
CHFR-218ENST00000540963 TRMT5Q32P41 509 aaKnown RBP23.03■■□□□ 1.28
CHFR-218ENST00000540963 C6orf89Q6UWU4 347 aa23.03■■□□□ 1.28
CHFR-218ENST00000540963 PEG10Q86TG7 708 aaKnown RBP23.03■■□□□ 1.28
CHFR-218ENST00000540963 CLIP4Q8N3C7 705 aa23.03■■□□□ 1.28
CHFR-218ENST00000540963 PNPT1Q8TCS8 783 aaKnown RBP23.03■■□□□ 1.28
CHFR-218ENST00000540963 ZNF416Q9BWM5 594 aa23.03■■□□□ 1.28
CHFR-218ENST00000540963 CENPHQ9H3R5 247 aa23.03■■□□□ 1.28
CHFR-218ENST00000540963 ZNF385DQ9H6B1 395 aa23.03■■□□□ 1.28
CHFR-218ENST00000540963 MEAF6Q9HAF1 191 aa23.03■■□□□ 1.28
CHFR-218ENST00000540963 C12orf10Q9HB07 376 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms