RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 RGS8P57771 180 aaPredicted RBP12.57□□□□□ -0.4
MSRB3-209ENST00000540804 MTPNP58546 118 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 DSCR9P59020 149 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 LOXL1Q08397 574 aaPredicted RBP12.57□□□□□ -0.4
MSRB3-209ENST00000540804 SQLEQ14534 574 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 CARTPTQ16568 116 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 RUNDC3AQ59EK9 446 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 FAM69AQ5T7M9 428 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 H1FNTQ75WM6 255 aaPredicted RBP12.57□□□□□ -0.4
MSRB3-209ENST00000540804 CXXC5Q7LFL8 322 aaKnown RBP12.57□□□□□ -0.4
MSRB3-209ENST00000540804 TMEM123Q8N131 208 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 ZCCHC24Q8N2G6 241 aaKnown RBP12.57□□□□□ -0.4
MSRB3-209ENST00000540804 GPR137CQ8N3F9 429 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 OR4D11Q8NGI4 311 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 DYDC1Q8WWB3 177 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 VRK1Q99986 396 aaPredicted RBP12.57□□□□□ -0.4
MSRB3-209ENST00000540804 KCNS3Q9BQ31 491 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 KATNB1Q9BVA0 655 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 TMEM38AQ9H6F2 299 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 C12orf10Q9HB07 376 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 NOX3Q9HBY0 568 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 OBP2BQ9NPH6 170 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 MED29Q9NX70 200 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 CRNNQ9UBG3 495 aaPredicted RBP12.57□□□□□ -0.4
MSRB3-209ENST00000540804 RCE1Q9Y256 329 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 PMF1-BGLAPU3KQ54 211 aa12.57□□□□□ -0.4
MSRB3-209ENST00000540804 A0A087WUJ7 227 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 A0A0B4J2E0 115 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 A0A1B0GX12 115 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 RPL36A-HNRNPH2H7BZ11 118 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 OR2T1O43869 369 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 SERPINI2O75830 405 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 MFN2O95140 757 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 CRYAAP02489 173 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 OR4A8P0C604 315 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 IGHV4-31P0DP07 118 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 NQO1P15559 274 aaKnown RBP12.56□□□□□ -0.4
MSRB3-209ENST00000540804 ZNF16P17020 682 aaPredicted RBP12.56□□□□□ -0.4
MSRB3-209ENST00000540804 PPIBP23284 216 aaKnown RBP12.56□□□□□ -0.4
MSRB3-209ENST00000540804 SLC6A2P23975 617 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 SERPINF1P36955 418 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 ATP4BP51164 291 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 IDH3GP51553 393 aaPredicted RBP12.56□□□□□ -0.4
MSRB3-209ENST00000540804 NPTX1Q15818 432 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 DUSP7Q16829 419 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 ULK3Q6PHR2 472 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 NHLRC1Q6VVB1 395 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 MDP1Q86V88 176 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 TSPYL5Q86VY4 417 aaPredicted RBP12.56□□□□□ -0.4
MSRB3-209ENST00000540804 KRT73Q86Y46 540 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 RBM45Q8IUH3 476 aaKnown RBP12.56□□□□□ -0.4
MSRB3-209ENST00000540804 ARMC8Q8IUR7 673 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 ARIH2OSQ8N7S6 290 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 GPR32P1Q8NGA4 272 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 MAGEE2Q8TD90 523 aaPredicted RBP12.56□□□□□ -0.4
MSRB3-209ENST00000540804 DNAJA4Q8WW22 397 aaPredicted RBP12.56□□□□□ -0.4
MSRB3-209ENST00000540804 SLC47A1Q96FL8 570 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 SPATA5L1Q9BVQ7 753 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 ZNF385DQ9H6B1 395 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 TESQ9UGI8 421 aaKnown RBP12.56□□□□□ -0.4
MSRB3-209ENST00000540804 GMEB1Q9Y692 573 aa12.56□□□□□ -0.4
MSRB3-209ENST00000540804 OR6C65A6NJZ3 312 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 EVPLLA8MZ36 301 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 IGKV3-15P01624 115 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 HLA-HP01893 362 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 THY1P04216 161 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 CBR1P16152 277 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 SLC25A16P16260 332 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 THBS4P35443 961 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 CAPZA2P47755 286 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 NCALDP61601 193 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 VLDLRP98155 873 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 POU3F1Q03052 451 aaPredicted RBP12.55□□□□□ -0.4
MSRB3-209ENST00000540804 NPRL3Q12980 569 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 CAMK2DQ13557 499 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 GGTLC2Q14390 218 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 FAM91A1Q658Y4 838 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 WDR88Q6ZMY6 472 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 IL17RELQ6ZVW7 336 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 SLC46A3Q7Z3Q1 461 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 DHDDSQ86SQ9 333 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 UEVLDQ8IX04 471 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 C20orf196Q8IYI0 205 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 C10orf53Q8N6V4 93 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 HIPK4Q8NE63 616 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 SLC41A3Q96GZ6 507 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 MS4A3Q96HJ5 214 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 FOXN4Q96NZ1 517 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 ZNF607Q96SK3 696 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 MCHR1Q99705 422 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 TMEM27Q9HBJ8 222 aa12.55□□□□□ -0.4
MSRB3-209ENST00000540804 INTS9Q9NV88 658 aaKnown RBP12.55□□□□□ -0.4
MSRB3-209ENST00000540804 SH3PXD2BA1X283 911 aa12.54□□□□□ -0.4
MSRB3-209ENST00000540804 SLC35F4A4IF30 521 aa12.54□□□□□ -0.4
MSRB3-209ENST00000540804 PRORSD1PA6NEY8 169 aa12.54□□□□□ -0.4
MSRB3-209ENST00000540804 CPSF4LA6NMK7 179 aaKnown RBP12.54□□□□□ -0.4
MSRB3-209ENST00000540804 VWC2LB2RUY7 222 aa12.54□□□□□ -0.4
MSRB3-209ENST00000540804 M0QX08 132 aa12.54□□□□□ -0.4
MSRB3-209ENST00000540804 IGFBP1P08833 259 aaPredicted RBP12.54□□□□□ -0.4
MSRB3-209ENST00000540804 BMP4P12644 408 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms