RNA–Protein interactions for RNA: ENST00000540755.5

CYB561A3-216, Transcript of cytochrome b561 family member A3, humanhuman

TSL 1 (best)

Gene CYB561A3, Length 1,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-216ENST00000540755 CNPY1Q3B7I2 92 aa12.82□□□□□ -0.36
CYB561A3-216ENST00000540755 EMC4Q5J8M3 183 aa12.82□□□□□ -0.36
CYB561A3-216ENST00000540755 B3GNT6Q6ZMB0 384 aa12.82□□□□□ -0.36
CYB561A3-216ENST00000540755 FAM122BQ7Z309 247 aa12.82□□□□□ -0.36
CYB561A3-216ENST00000540755 CPOQ8IVL8 374 aa12.82□□□□□ -0.36
CYB561A3-216ENST00000540755 OR2M7Q8NG81 312 aa12.82□□□□□ -0.36
CYB561A3-216ENST00000540755 FCGR1BQ92637 280 aa12.82□□□□□ -0.36
CYB561A3-216ENST00000540755 HAS2Q92819 552 aa12.82□□□□□ -0.36
CYB561A3-216ENST00000540755 BCL7BQ9BQE9 202 aa12.82□□□□□ -0.36
CYB561A3-216ENST00000540755 PIGQQ9BRB3 760 aa12.82□□□□□ -0.36
CYB561A3-216ENST00000540755 OR2B2Q9GZK3 357 aa12.82□□□□□ -0.36
CYB561A3-216ENST00000540755 ALKBH4Q9NXW9 302 aa12.82□□□□□ -0.36
CYB561A3-216ENST00000540755 TAS2R5Q9NYW4 299 aa12.82□□□□□ -0.36
CYB561A3-216ENST00000540755 H2AFY2Q9P0M6 372 aaPredicted RBP12.82□□□□□ -0.36
CYB561A3-216ENST00000540755 HDGFL3Q9Y3E1 203 aa12.82□□□□□ -0.36
CYB561A3-216ENST00000540755 FREM3P0C091 2139 aa12.82□□□□□ -0.36
CYB561A3-216ENST00000540755 OR2M5A3KFT3 312 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 LIPT2A6NK58 231 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 PRR23D1E9PI22 279 aaPredicted RBP12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 M0R082 166 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 PLPP3O14495 311 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 STSP08842 583 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 PRR23D2P0DMB1 279 aaPredicted RBP12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 HIST1H1CP16403 213 aaKnown RBP12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 PAICSP22234 425 aaKnown RBP12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 GTF2E2P29084 291 aaKnown RBP12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 C21orf33P30042 268 aaPredicted RBP12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 SDHAP31040 664 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 MTNR1AP48039 350 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 TMBIM6P55061 237 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 ERVK-25P63136 954 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 FOXK1P85037 733 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 RAB40BQ12829 278 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 ZP4Q12836 540 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 ITGADQ13349 1161 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 PMS2P3Q13401 168 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 TMED1Q13445 227 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 CRMP1Q14194 572 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 IRF3Q14653 427 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 OR7A5Q15622 319 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 TBCEQ15813 527 aaPredicted RBP12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 NEDD8Q15843 81 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 KLHL22Q53GT1 634 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 RAET1LQ5VY80 246 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 RNLSQ5VYX0 342 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 GPR139Q6DWJ6 353 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 NIPAL3Q6P499 406 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 PLBD1Q6P4A8 553 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 SLC37A3Q8NCC5 494 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 ATP6V1C2Q8NEY4 427 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 OR5M1Q8NGP8 315 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 C9orf43Q8TAL5 461 aaPredicted RBP12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 ZNF417Q8TAU3 575 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 ZNF587Q96SQ5 575 aaPredicted RBP12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 CDCA4Q9BXL8 241 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 FANCFQ9NPI8 374 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 KLHL1Q9NR64 748 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 INIPQ9NRY2 104 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 RPH3AQ9Y2J0 694 aaPredicted RBP12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 KLF13Q9Y2Y9 288 aaPredicted RBP12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 ADAM18Q9Y3Q7 739 aa12.81□□□□□ -0.36
CYB561A3-216ENST00000540755 PINLYPA6NC86 204 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 CCDC160A6NGH7 325 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 FAM183AA6NL82 134 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 NME2P1O60361 137 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 NOL3O60936 208 aaKnown RBP12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 SEC14L2O76054 403 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 OR6A2O95222 327 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 IGHMP01871 453 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 F13BP05160 661 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 SP1P08047 785 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 RFPL3SP0C7P2 107 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 ADORA3P0DMS8 318 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 NME2P22392 152 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 TCEA1P23193 301 aaKnown RBP12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 GSTT1P30711 240 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 NFATC3Q12968 1075 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 MYBPHQ13203 477 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 TBR1Q16650 682 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 ARMC4Q5T2S8 1044 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 GTF2IRD2BQ6EKJ0 949 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 SLC25A25Q6KCM7 469 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 IGFL2Q6UWQ7 119 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 H1FNTQ75WM6 255 aaPredicted RBP12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 MEPCEQ7L2J0 689 aaKnown RBP12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 GTF2IRD2Q86UP8 949 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 SULF2Q8IWU5 870 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 FAM98AQ8NCA5 519 aaKnown RBP12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 ADPRHL1Q8NDY3 354 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 BBS1Q8NFJ9 593 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 OR52E2Q8NGJ4 325 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 OR13F1Q8NGS4 319 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 OR4K13Q8NH42 304 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 FAR1Q8WVX9 515 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 PTP4A1Q93096 173 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 MUL1Q969V5 352 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 RNFT2Q96EX2 444 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 DNAJA3Q96EY1 480 aa12.8□□□□□ -0.36
CYB561A3-216ENST00000540755 TMEM80Q96HE8 168 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms