RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	TMEM43	Q9BTV4	400 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	PRR14	Q9BWN1	585 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	RPS6KB2	Q9UBS0	482 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	LEF1	Q9UJU2	399 aa	Predicted RBP	11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	CORIN	Q9Y5Q5	1042 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ATP23	Q9Y6H3	246 aa		11.42	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ATP6V1G2-DDX39B	F2Z307	99 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475		M0R082	166 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	KRT33A	O76009	404 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	PDE5A	O76074	875 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	F12	P00748	615 aa	Predicted RBP	11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	BGLAP	P02818	100 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	GRPR	P30550	384 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	EFNA4	P52798	201 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ROR2	Q01974	943 aa	Known RBP	11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	CHRNB3	Q05901	458 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	LOXL1	Q08397	574 aa	Predicted RBP	11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	METTL21C	Q5VZV1	264 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ZNF627	Q7L945	461 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	HDX	Q7Z353	690 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	RETREG3	Q86VR2	466 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ZNF417	Q8TAU3	575 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	DYDC1	Q8WWB3	177 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	PROX1	Q92786	737 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	OR2M2	Q96R28	347 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ZNF587	Q96SQ5	575 aa	Predicted RBP	11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ARHGDIG	Q99819	225 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SIKE1	Q9BRV8	207 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	TMEM27	Q9HBJ8	222 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	GPR35	Q9HC97	309 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	MRPL39	Q9NYK5	338 aa	Known RBP	11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	MOK	Q9UQ07	419 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	NDUFAF1	Q9Y375	327 aa		11.41	□□□□□ -0.58
SEMA4D-223	ENST00000540475	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	EDF1	O60869	148 aa	Known RBP	11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SLC43A1	O75387	559 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	HPR	P00739	348 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	H2AFX	P16104	143 aa	Predicted RBP	11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	CBR1	P16152	277 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	SLC25A16	P16260	332 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	CDH2	P19022	906 aa	Predicted RBP	11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	GTF2E2	P29084	291 aa	Known RBP	11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	GZMM	P51124	257 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	NUDT6	P53370	316 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	CDH12	P55289	794 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	RGS8	P57771	180 aa	Predicted RBP	11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	UBE2N	P61088	152 aa	Known RBP	11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	NAAA	Q02083	359 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	EFNB3	Q15768	340 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	DUSP7	Q16829	419 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	HMBOX1	Q6NT76	420 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ZNF613	Q6PF04	617 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	CLEC2A	Q6UVW9	174 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	HIPK1	Q86Z02	1210 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ARMC8	Q8IUR7	673 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	CCDC36	Q8IYA8	594 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	C20orf196	Q8IYI0	205 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	C11orf65	Q8NCR3	313 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	PIK3C3	Q8NEB9	887 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	C10orf105	Q8TEF2	133 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	TNFRSF13C	Q96RJ3	184 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	EPYC	Q99645	322 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	CGREF1	Q99674	301 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	PCDHAC1	Q9H158	963 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	KAT8	Q9H7Z6	458 aa	Known RBP	11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	CA10	Q9NS85	328 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	TRIM33	Q9UPN9	1127 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	PMF1-BGLAP	U3KQ54	211 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	ATR	Q13535	2644 aa		11.4	□□□□□ -0.58
SEMA4D-223	ENST00000540475	COL6A5	A8TX70	2615 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	RTTN	Q86VV8	2226 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	VWC2L	B2RUY7	222 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	AKAP8	O43823	692 aa	Known RBP	11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	LYPD3	O95274	346 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	CRYAA	P02489	173 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	CSF3	P09919	207 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	CECR9	P0C854	216 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	ARF1	P84077	181 aa	Known RBP	11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	VLDLR	P98155	873 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	SELPLG	Q14242	412 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	PHYHD1	Q5SRE7	291 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	CCDC80	Q76M96	950 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	PXK	Q7Z7A4	578 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	DHDDS	Q86SQ9	333 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	RANBP3L	Q86VV4	465 aa	Predicted RBP	11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	SLC30A8	Q8IWU4	369 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	NUP37	Q8NFH4	326 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	GPR32P1	Q8NGA4	272 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	OR4F15	Q8NGB8	312 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	ZNF837	Q96EG3	531 aa	Predicted RBP	11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	MOGAT1	Q96PD6	335 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	ZNF426	Q9BUY5	554 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	CRLF2	Q9HC73	371 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	B3GNT2	Q9NY97	397 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	FBXO9	Q9UK97	447 aa	Predicted RBP	11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	ANGPT4	Q9Y264	503 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	NOX1	Q9Y5S8	564 aa		11.39	□□□□□ -0.59
SEMA4D-223	ENST00000540475	MALRD1	Q5VYJ5	2156 aa		11.38	□□□□□ -0.59
SEMA4D-223	ENST00000540475		A0A096LPE4	126 aa		11.38	□□□□□ -0.59

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