RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 VRK1Q99986 396 aaPredicted RBP8□□□□□ -1.13
DDB1-217ENST00000540166 SOSTQ9BQB4 213 aa8□□□□□ -1.13
DDB1-217ENST00000540166 TMEM231Q9H6L2 316 aa8□□□□□ -1.13
DDB1-217ENST00000540166 C1GALT1Q9NS00 363 aa8□□□□□ -1.13
DDB1-217ENST00000540166 ACSS1Q9NUB1 689 aaPredicted RBP8□□□□□ -1.13
DDB1-217ENST00000540166 SOHLH2Q9NX45 425 aa8□□□□□ -1.13
DDB1-217ENST00000540166 KCMF1Q9P0J7 381 aa8□□□□□ -1.13
DDB1-217ENST00000540166 ING1Q9UK53 422 aaPredicted RBP8□□□□□ -1.13
DDB1-217ENST00000540166 PCDHB10Q9UN67 800 aa8□□□□□ -1.13
DDB1-217ENST00000540166 EPG5Q9HCE0 2579 aa8□□□□□ -1.13
DDB1-217ENST00000540166 NOTCH4Q99466 2003 aa8□□□□□ -1.13
DDB1-217ENST00000540166 RAD1O60671 282 aa8□□□□□ -1.13
DDB1-217ENST00000540166 EIF1BO60739 113 aaKnown RBP8□□□□□ -1.13
DDB1-217ENST00000540166 GKN3PP0CG01 181 aa8□□□□□ -1.13
DDB1-217ENST00000540166 ACP5P13686 325 aa8□□□□□ -1.13
DDB1-217ENST00000540166 EIF1P41567 113 aaKnown RBP8□□□□□ -1.13
DDB1-217ENST00000540166 SPINT3P49223 89 aa8□□□□□ -1.13
DDB1-217ENST00000540166 LIM2P55344 173 aa8□□□□□ -1.13
DDB1-217ENST00000540166 PFN3P60673 137 aa8□□□□□ -1.13
DDB1-217ENST00000540166 IKZF1Q13422 519 aa8□□□□□ -1.13
DDB1-217ENST00000540166 RBMS2Q15434 407 aaKnown RBP8□□□□□ -1.13
DDB1-217ENST00000540166 SLC25A35Q3KQZ1 300 aa8□□□□□ -1.13
DDB1-217ENST00000540166 TMEM71Q6P5X7 295 aa8□□□□□ -1.13
DDB1-217ENST00000540166 TMPRSS12Q86WS5 348 aa8□□□□□ -1.13
DDB1-217ENST00000540166 AKR7LQ8NHP1 331 aa8□□□□□ -1.13
DDB1-217ENST00000540166 GCDHQ92947 438 aaPredicted RBP8□□□□□ -1.13
DDB1-217ENST00000540166 UBL7Q96S82 380 aaPredicted RBP8□□□□□ -1.13
DDB1-217ENST00000540166 MRPS30Q9NP92 439 aaKnown RBP8□□□□□ -1.13
DDB1-217ENST00000540166 OR2S2Q9NQN1 319 aa8□□□□□ -1.13
DDB1-217ENST00000540166 CA10Q9NS85 328 aa8□□□□□ -1.13
DDB1-217ENST00000540166 ZCCHC3Q9NUD5 404 aaKnown RBP8□□□□□ -1.13
DDB1-217ENST00000540166 GHRLQ9UBU3 117 aa8□□□□□ -1.13
DDB1-217ENST00000540166 FAM208BQ5VWN6 2430 aa8□□□□□ -1.13
DDB1-217ENST00000540166 SZT2Q5T011 3432 aa8□□□□□ -1.13
DDB1-217ENST00000540166 TSTD3H0UI37 97 aa8□□□□□ -1.13
DDB1-217ENST00000540166 C6P13671 934 aa8□□□□□ -1.13
DDB1-217ENST00000540166 SPI1P17947 270 aa8□□□□□ -1.13
DDB1-217ENST00000540166 EDNRAP25101 427 aa8□□□□□ -1.13
DDB1-217ENST00000540166 GPR4P46093 362 aa8□□□□□ -1.13
DDB1-217ENST00000540166 ZP1P60852 638 aa8□□□□□ -1.13
DDB1-217ENST00000540166 GABREP78334 506 aa8□□□□□ -1.13
DDB1-217ENST00000540166 SLC6A19Q695T7 634 aa8□□□□□ -1.13
DDB1-217ENST00000540166 EIF5AL1Q6IS14 154 aaKnown RBP8□□□□□ -1.13
DDB1-217ENST00000540166 RAB42Q8N4Z0 105 aa8□□□□□ -1.13
DDB1-217ENST00000540166 ZNF561Q8N587 486 aa8□□□□□ -1.13
DDB1-217ENST00000540166 AVL9Q8NBF6 648 aa8□□□□□ -1.13
DDB1-217ENST00000540166 IFI44Q8TCB0 444 aa8□□□□□ -1.13
DDB1-217ENST00000540166 RXFP4Q8TDU9 374 aa8□□□□□ -1.13
DDB1-217ENST00000540166 NEIL2Q969S2 332 aa8□□□□□ -1.13
DDB1-217ENST00000540166 ECHDC3Q96DC8 303 aa8□□□□□ -1.13
DDB1-217ENST00000540166 EFCAB11Q9BUY7 163 aa8□□□□□ -1.13
DDB1-217ENST00000540166 HDAC8Q9BY41 377 aa8□□□□□ -1.13
DDB1-217ENST00000540166 HRH4Q9H3N8 390 aa8□□□□□ -1.13
DDB1-217ENST00000540166 ENTPD4Q9Y227 616 aa8□□□□□ -1.13
DDB1-217ENST00000540166 OR1A2Q9Y585 309 aa8□□□□□ -1.13
DDB1-217ENST00000540166 GGT3PA6NGU5 568 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 SLC16A5O15375 505 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 HPP00738 406 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 ACAA1P09110 424 aaPredicted RBP7.99□□□□□ -1.13
DDB1-217ENST00000540166 NXPH1P58417 271 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 ZNF124Q15973 351 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 GUCA2BQ16661 112 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 ZNF660Q6AZW8 331 aaPredicted RBP7.99□□□□□ -1.13
DDB1-217ENST00000540166 GRHL2Q6ISB3 625 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 ADAM5Q6NVV9 412 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 FRRS1Q6ZNA5 592 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 C6orf120Q7Z4R8 191 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 LDLRAD3Q86YD5 345 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 POGLUT1Q8NBL1 392 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 OR2AK2Q8NG84 335 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 OR4Q3Q8NH05 313 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 SLC38A5Q8WUX1 472 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 FGF11Q92914 225 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 RAD51AP1Q96B01 352 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 WDR89Q96FK6 387 aaPredicted RBP7.99□□□□□ -1.13
DDB1-217ENST00000540166 TMPRSS13Q9BYE2 586 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 FAM117AQ9C073 453 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 RGCCQ9H4X1 137 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 CAPN10Q9HC96 672 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 SERGEFQ9UGK8 458 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 SF3B6Q9Y3B4 125 aaKnown RBP7.99□□□□□ -1.13
DDB1-217ENST00000540166 A0A1W2PRQ8 180 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 GABARAPH6UMI1 98 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 RTCAO00442 366 aaKnown RBP7.99□□□□□ -1.13
DDB1-217ENST00000540166 IMPA2O14732 288 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 AGPAT2O15120 278 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 YY2O15391 372 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 PLRG1O43660 514 aaKnown RBP7.99□□□□□ -1.13
DDB1-217ENST00000540166 POP7O75817 140 aaKnown RBP7.99□□□□□ -1.13
DDB1-217ENST00000540166 ZNF883P0CG24 379 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 OR12D1P0DN82 309 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 NQO2P16083 231 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 MRPS10P82664 201 aaKnown RBP7.99□□□□□ -1.13
DDB1-217ENST00000540166 MELKQ14680 651 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 LINC00303Q3SY05 128 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 CDNFQ49AH0 187 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 CCSMST1Q4G0I0 132 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 UBE2NLQ5JXB2 153 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 UNQ6126/PRO20091Q6UXV3 157 aa7.99□□□□□ -1.13
DDB1-217ENST00000540166 RBMS3Q6XE24 437 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms