RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 ZNF426Q9BUY5 554 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 C20orf85Q9H1P6 137 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 RXFP3Q9NSD7 469 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 SPATA2Q9UM82 520 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 A0A087WUJ7 227 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 IGHV5-51A0A0C4DH38 117 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 HCRTR2O43614 444 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 LTBQ06643 244 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 TNK1Q13470 666 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 GSG1Q2KHT4 349 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 C1orf189Q5VU69 101 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 OR8S1Q8NH09 359 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 GPBAR1Q8TDU6 330 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 LMX1AQ8TE12 382 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 SLC25A38Q96DW6 304 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 SCMH1Q96GD3 660 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 HYLS1Q96M11 299 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 LRRC61Q9BV99 259 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 GTPBP2Q9BX10 602 aaKnown RBP12.45□□□□□ -0.42
BNIP3-202ENST00000540159 JAM3Q9BX67 310 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 NIPAL2Q9H841 368 aa12.45□□□□□ -0.42
BNIP3-202ENST00000540159 THADAQ6YHU6 1953 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 TRAV8-7A0A075B6U6 113 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 CLDN4O14493 209 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 SIX6O95475 246 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 DNASE1P24855 282 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 MST1P26927 711 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 RAD52P43351 418 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 OR3A3P47888 321 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 ACTA2P62736 377 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 ACTG2P63267 376 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 ZP2Q05996 745 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 MEP1BQ16820 701 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 TMEM69Q5SWH9 247 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 LRRN1Q6UXK5 716 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 ZNF550Q7Z398 422 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 MDGA2Q7Z553 956 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 LUZP2Q86TE4 346 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 KCTD12Q96CX2 325 aaKnown RBP12.44□□□□□ -0.42
BNIP3-202ENST00000540159 DDOQ99489 341 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 SLC38A3Q99624 504 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 ZMAT3Q9HA38 289 aaKnown RBP12.44□□□□□ -0.42
BNIP3-202ENST00000540159 TCF7L1Q9HCS4 588 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 INPP5EQ9NRR6 644 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 ZNF69Q9UC07 566 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 IFITM5A6NNB3 132 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 ZNF879B4DU55 563 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 GPR171O14626 319 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 AK1P00568 194 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 CDK2P24941 298 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 GPR3P46089 330 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 LGALS3BPQ08380 585 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 ETFDHQ16134 617 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 RFPL4BQ6ZWI9 263 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 GLB1L2Q8IW92 636 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 PM20D2Q8IYS1 436 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 OR14A16Q8NHC5 309 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 CCDC120Q96HB5 630 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 LPAR4Q99677 370 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 SEMA6CQ9H3T2 930 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 POMT2Q9UKY4 750 aa12.44□□□□□ -0.42
BNIP3-202ENST00000540159 CDC40O60508 579 aaKnown RBP eCLIP12.43□□□□□ -0.42
BNIP3-202ENST00000540159 PRAMEF2O60811 474 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 AKR7A3O95154 331 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 CFDP00746 253 aaPredicted RBP12.43□□□□□ -0.42
BNIP3-202ENST00000540159 TACR3P29371 465 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 GPR143P51810 404 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 ZP1P60852 638 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 GUCA2AQ02747 115 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 CDONQ4KMG0 1287 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 VWA2Q5GFL6 755 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 RPL22L1Q6P5R6 122 aaKnown RBP12.43□□□□□ -0.42
BNIP3-202ENST00000540159 FAM199XQ6PEV8 388 aaPredicted RBP12.43□□□□□ -0.42
BNIP3-202ENST00000540159 ZNF676Q8N7Q3 588 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 DVL3Q92997 716 aaPredicted RBP12.43□□□□□ -0.42
BNIP3-202ENST00000540159 FRRS1LQ9P0K9 344 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 CLDN16Q9Y5I7 305 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 SPTY2D1-AS1A0A0U1RR47 76 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 ZSCAN5BA6NJL1 495 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 POM121CA8CG34 1229 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 OGG1O15527 345 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 OR7A10O76100 309 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 SERPINA3P01011 423 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 ADRA2CP18825 462 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 RPL18Q07020 188 aaKnown RBP12.43□□□□□ -0.42
BNIP3-202ENST00000540159 HTR4Q13639 388 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 EXOSC6Q5RKV6 272 aaKnown RBP12.43□□□□□ -0.42
BNIP3-202ENST00000540159 TIGD3Q6B0B8 471 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 CHRDL2Q6WN34 429 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 OR6V1Q8N148 313 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 SIX5Q8N196 739 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 LSMEM1Q8N8F7 131 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 TMEM106AQ96A25 262 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 HRASLSQ9HDD0 168 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 GRHPRQ9UBQ7 328 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 OR5V1Q9UGF6 321 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 MRM2Q9UI43 246 aaKnown RBP12.43□□□□□ -0.42
BNIP3-202ENST00000540159 KCNG2Q9UJ96 466 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 LAMP5Q9UJQ1 280 aa12.43□□□□□ -0.42
BNIP3-202ENST00000540159 SERTAD3Q9UJW9 196 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms