RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 TXNDC15Q96J42 360 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 PRRC1Q96M27 445 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 MUS81Q96NY9 551 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 USB1Q9BQ65 265 aaKnown RBP16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 MAN2C1Q9NTJ4 1040 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 C20orf141Q9NUB4 165 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 TAS2R5Q9NYW4 299 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 NPAP1Q9NZP6 1156 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 RHCGQ9UBD6 479 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 RCE1Q9Y256 329 aa16.08■□□□□ 0.16
SNRPA1-203ENST00000540017 ENO4A6NNW6 628 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 C11orf98E9PRG8 122 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 PIP5K1CO60331 668 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 PRSS23O95084 383 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 MT-ND1P03886 318 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 IFNW1P05000 195 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 ASAH2BP0C7U1 165 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 T-ENOLP0DO92 83 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 THRBP10828 461 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 MPGP29372 298 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 RBM34P42696 430 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 POU3F1Q03052 451 aaPredicted RBP16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 PUDPQ08623 228 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 PAMR1Q6UXH9 720 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 FKBP9P1Q75LS8 142 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 UEVLDQ8IX04 471 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 TMEM123Q8N131 208 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 WDR31Q8NA23 367 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 OR52N5Q8NH56 324 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 TMEM239Q8WW34 195 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 NSL1Q96IY1 281 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 ALKBH3Q96Q83 286 aaPredicted RBP16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 OR2M2Q96R28 347 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 TMEM204Q9BSN7 226 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 EMC6Q9BV81 110 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 LINC00470Q9BZP3 86 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 FKRPQ9H9S5 495 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 NANSQ9NR45 359 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 CCM2LQ9NUG4 571 aaPredicted RBP16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 DCAF13Q9NV06 445 aaKnown RBP16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 MED29Q9NX70 200 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 SLC25A15Q9Y619 301 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 MYO9AB2RTY4 2548 aa16.07■□□□□ 0.16
SNRPA1-203ENST00000540017 DPRXA6NFQ7 191 aa16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 B2RBV5 119 aa16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 SERPINI2O75830 405 aa16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 ATE1O95260 518 aa16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 ADORA3P0DMS8 318 aa16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 CDH2P19022 906 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 AHCYP23526 432 aa16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 MXRA7P84157 204 aa16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 TESK1Q15569 626 aa16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 SAMD4BQ5PRF9 694 aaKnown RBP16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 PHYHD1Q5SRE7 291 aa16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 NCMAPQ5T1S8 102 aa16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 C16orf89Q6UX73 402 aa16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 P2RY8Q86VZ1 359 aa16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 ZNF837Q96EG3 531 aaPredicted RBP16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 ZNF229Q9UJW7 825 aa16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 NOX1Q9Y5S8 564 aa16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 CCDC168Q8NDH2 2452 aa16.06■□□□□ 0.16
SNRPA1-203ENST00000540017 ALPK2Q86TB3 2170 aa16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 KRT33AO76009 404 aa16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 NR1H2P55055 460 aa16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 ST3GAL3Q11203 375 aa16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 ZP4Q12836 540 aa16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 CARD17Q5XLA6 110 aa16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 OR7E24Q6IFN5 339 aa16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 ZNF704Q6ZNC4 412 aaPredicted RBP16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 RINLQ6ZS11 566 aa16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 PXKQ7Z7A4 578 aa16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 OFCC1Q8IZS5 231 aa16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 C1orf162Q8NEQ5 155 aaPredicted RBP16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 LILRB1Q8NHL6 650 aaPredicted RBP16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 NINJ1Q92982 152 aa16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 MUCL1Q96DR8 90 aa16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 HS6ST2Q96MM7 605 aa16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 GORASP2Q9H8Y8 452 aa16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 UBTD1Q9HAC8 227 aa16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 SLC17A5Q9NRA2 495 aa16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 RPS6KA6Q9UK32 745 aa16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 RAI1Q7Z5J4 1906 aaPredicted RBP16.05■□□□□ 0.16
SNRPA1-203ENST00000540017 SLC35F4A4IF30 521 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 ZNF587BE7ETH6 402 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 ARPC2O15144 300 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 SLC43A1O75387 559 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 OR7A10O76100 309 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 RAF1P04049 648 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 UMPSP11172 480 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 CD53P19397 219 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 FUT1P19526 365 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 MNAT1P51948 309 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 ROR2Q01974 943 aaKnown RBP16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 BSPH1Q075Z2 132 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 HIKESHIQ53FT3 197 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 MEX3DQ86XN8 651 aaKnown RBP16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 SGTBQ96EQ0 304 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 C7orf34Q96L11 122 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 FNDC11Q9BVV2 318 aa16.04■□□□□ 0.16
SNRPA1-203ENST00000540017 C1QTNF6Q9BXI9 259 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms