RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 OR4F15Q8NGB8 312 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 OR52H1Q8NGJ2 320 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 OR4Q3Q8NH05 313 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 MOSPD2Q8NHP6 518 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 GIMAP1Q8WWP7 306 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 RAB40AQ8WXH6 277 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 NSMAFQ92636 917 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 HIST1H2ACQ93077 130 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 AIF1LQ9BQI0 150 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 PLA2G12AQ9BZM1 189 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 MRPL18Q9H0U6 180 aaKnown RBP7.02□□□□□ -1.29
CCDC60-204ENST00000539847 ALX4Q9H161 411 aaPredicted RBP7.02□□□□□ -1.29
CCDC60-204ENST00000539847 MTG2Q9H4K7 406 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 METTL17Q9H7H0 456 aaPredicted RBP7.02□□□□□ -1.29
CCDC60-204ENST00000539847 SLAMF7Q9NQ25 335 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 ASCL3Q9NQ33 180 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 GPR27Q9NS67 375 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 C14orf105Q9NVL8 296 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 MED11Q9P086 117 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 NTMQ9P121 344 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 FBXO9Q9UK97 447 aaPredicted RBP7.02□□□□□ -1.29
CCDC60-204ENST00000539847 SLC13A4Q9UKG4 626 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 GPR34Q9UPC5 381 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 PRELID3BQ9Y3B1 194 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 LRRK2Q5S007 2527 aa7.02□□□□□ -1.29
CCDC60-204ENST00000539847 LOC105369274A0A096LPK9 316 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 DAPL1A0PJW8 107 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 SLC22A23A1A5C7 686 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 TRAPPC13A5PLN9 417 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 DUXAA6NLW8 204 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 K7ENP7 123 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 PLPP1O14494 284 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 FMO6PO60774 539 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 PIAS2O75928 621 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 APOL3O95236 402 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 EPPINO95925 133 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 ATP1B1P05026 303 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 MELTFP08582 738 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 CHRM5P08912 532 aaPredicted RBP7.01□□□□□ -1.29
CCDC60-204ENST00000539847 GABRA1P14867 456 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 ACADLP28330 430 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 AKT2P31751 481 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 TRIM23P36406 574 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 CBX5P45973 191 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 CCR8P51685 355 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 CLDN6P56747 220 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 TAS2R38P59533 333 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 TAS2R41P59536 307 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 SEC61A1P61619 476 aaKnown RBP7.01□□□□□ -1.29
CCDC60-204ENST00000539847 HNRNPKP61978 463 aaKnown RBP eCLIP7.01□□□□□ -1.29
CCDC60-204ENST00000539847 BTN1A1Q13410 526 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 IL10RAQ13651 578 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 HLXQ14774 488 aaPredicted RBP7.01□□□□□ -1.29
CCDC60-204ENST00000539847 SYPL1Q16563 259 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 CCSMST1Q4G0I0 132 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 ACSM3Q53FZ2 586 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 PABPC1L2AQ5JQF8 200 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 UBE2NLQ5JXB2 153 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 NIPAL3Q6P499 406 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 FDX2Q6P4F2 183 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 INO80CQ6PI98 192 aaPredicted RBP7.01□□□□□ -1.29
CCDC60-204ENST00000539847 TMEM220Q6QAJ8 160 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 UQCC3Q6UW78 93 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 LIPIQ6XZB0 460 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 RFLNAQ6ZTI6 216 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 DPPA4Q7L190 304 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 NUDT13Q86X67 352 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 OR4N4Q8N0Y3 316 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 CLRN3Q8NCR9 226 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 OR5M9Q8NGP3 310 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 OR6K2Q8NGY2 324 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 OR6K3Q8NGY3 331 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 XAGE5Q8WWM1 108 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 RAB8BQ92930 207 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 PNPLA2Q96AD5 504 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 RAD51AP1Q96B01 352 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 SLC46A1Q96NT5 459 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 AMDHD1Q96NU7 426 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 ALG8Q9BVK2 526 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 ZNF416Q9BWM5 594 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 C20orf85Q9H1P6 137 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 UBQLN3Q9H347 655 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 RERGLQ9H628 205 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 EGLN3Q9H6Z9 239 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 MTHFD2LQ9H903 347 aaPredicted RBP7.01□□□□□ -1.29
CCDC60-204ENST00000539847 HRASLSQ9HDD0 168 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 SLC35C2Q9NQQ7 365 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 PRR13Q9NZ81 148 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 MGAT4CQ9UBM8 478 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 ZMAT5Q9UDW3 170 aaKnown RBP7.01□□□□□ -1.29
CCDC60-204ENST00000539847 IL20RAQ9UHF4 553 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 SLC25A13Q9UJS0 675 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 GPR55Q9Y2T6 319 aaPredicted RBP7.01□□□□□ -1.29
CCDC60-204ENST00000539847 PCDHGA9Q9Y5G4 932 aaKnown RBP7.01□□□□□ -1.29
CCDC60-204ENST00000539847 HS3ST3A1Q9Y663 406 aa7.01□□□□□ -1.29
CCDC60-204ENST00000539847 SCN8AQ9UQD0 1980 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 PLXNA2O75051 1894 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 LY6G6EA0A0G2JKS1 128 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 ANKRD20A5PA0PJZ0 165 aa7□□□□□ -1.29
CCDC60-204ENST00000539847 PQLC2LA1A4F0 135 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms