RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 SLC25A1P53007 311 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 ZNF404Q494X3 552 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 SLC25A53Q5H9E4 307 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 ZNF468Q5VIY5 522 aaPredicted RBP20.25■□□□□ 0.83
HOMER3-204ENST00000539827 GPR139Q6DWJ6 353 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 C22orf42Q6IC83 251 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 DEFB124Q8NES8 71 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 DDIT4LQ96D03 193 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 MRGPRX4Q96LA9 322 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 TMED9Q9BVK6 235 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 P4HTMQ9NXG6 502 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 CCDC59Q9P031 241 aaKnown RBP20.25■□□□□ 0.83
HOMER3-204ENST00000539827 SIRT4Q9Y6E7 314 aaPredicted RBP20.25■□□□□ 0.83
HOMER3-204ENST00000539827 J3QRK9 145 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 TNFRSF10AO00220 468 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 ETV2O00321 342 aaPredicted RBP20.25■□□□□ 0.83
HOMER3-204ENST00000539827 SLC30A4O14863 429 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 ARHGEF9O43307 516 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 OPN1LWP04000 364 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 ACTC1P68032 377 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 ACTA1P68133 377 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 TCF15Q12870 199 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 LINC01590Q5TEZ4 76 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 B3GNTL1Q67FW5 361 aaPredicted RBP20.25■□□□□ 0.83
HOMER3-204ENST00000539827 FADS6Q8N9I5 356 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 POMGNT2Q8NAT1 580 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 C4orf36Q96KX1 117 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 ALG12Q9BV10 488 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 CDADC1Q9BWV3 514 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 HPF1Q9NWY4 346 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 CORINQ9Y5Q5 1042 aa20.25■□□□□ 0.83
HOMER3-204ENST00000539827 MRPS18BQ9Y676 258 aaKnown RBP20.25■□□□□ 0.83
HOMER3-204ENST00000539827 CACNA1HO95180 2353 aa20.24■□□□□ 0.83
HOMER3-204ENST00000539827 MAGEB4O15481 346 aaPredicted RBP20.24■□□□□ 0.83
HOMER3-204ENST00000539827 ZNF208O43345 1280 aa20.24■□□□□ 0.83
HOMER3-204ENST00000539827 RENP00797 406 aa20.24■□□□□ 0.83
HOMER3-204ENST00000539827 IMPDH2P12268 514 aa20.24■□□□□ 0.83
HOMER3-204ENST00000539827 GABRA5P31644 462 aa20.24■□□□□ 0.83
HOMER3-204ENST00000539827 ACVR1BP36896 505 aa20.24■□□□□ 0.83
HOMER3-204ENST00000539827 RPS19P39019 145 aaKnown RBP20.24■□□□□ 0.83
HOMER3-204ENST00000539827 OR12D2P58182 307 aa20.24■□□□□ 0.83
HOMER3-204ENST00000539827 FABP5Q01469 135 aa20.24■□□□□ 0.83
HOMER3-204ENST00000539827 SNTA1Q13424 505 aa20.24■□□□□ 0.83
HOMER3-204ENST00000539827 IL10RAQ13651 578 aa20.24■□□□□ 0.83
HOMER3-204ENST00000539827 ACKR1Q16570 336 aa20.24■□□□□ 0.83
HOMER3-204ENST00000539827 MARCH9Q86YJ5 346 aa20.24■□□□□ 0.83
HOMER3-204ENST00000539827 KDM8Q8N371 416 aa20.24■□□□□ 0.83
HOMER3-204ENST00000539827 ZNF511Q8NB15 262 aa20.24■□□□□ 0.83
HOMER3-204ENST00000539827 NLGN4YQ8NFZ3 816 aaPredicted RBP20.24■□□□□ 0.83
HOMER3-204ENST00000539827 FAM86C1Q9NVL1 165 aa20.24■□□□□ 0.83
HOMER3-204ENST00000539827 MRPL39Q9NYK5 338 aaKnown RBP20.24■□□□□ 0.83
HOMER3-204ENST00000539827 FAM47E-STBD1D6RA91 191 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 E9PI62 339 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 ZNF670-ZNF695F2Z2N8 137 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 DCTN6O00399 190 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 MT-ND5P03915 603 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 ICAM2P13598 275 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 TGM1P22735 817 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 ZNF829Q3KNS6 432 aaPredicted RBP20.23■□□□□ 0.83
HOMER3-204ENST00000539827 STPG1Q5TH74 334 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 OR6S1Q8NH40 331 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 MFSD8Q8NHS3 518 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 ANGPTL4Q9BY76 406 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 PROK2Q9HC23 129 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 ANKRD10Q9NXR5 420 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 ZMIZ1Q9ULJ6 1067 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 COPS3Q9UNS2 423 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 PCNX2A6NKB5 2137 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 LOC101059948A0A1B0GTJ6 334 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 RAD1O60671 282 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 OR2T7P0C7T2 308 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 RPL27P61353 136 aaKnown RBP20.23■□□□□ 0.83
HOMER3-204ENST00000539827 CHAF1BQ13112 559 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 GLYR1Q49A26 553 aaPredicted RBP20.23■□□□□ 0.83
HOMER3-204ENST00000539827 TP53I3Q53FA7 332 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 SLC22A10Q63ZE4 541 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 VASNQ6EMK4 673 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 PLCZ1Q86YW0 608 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 ARIH2OSQ8N7S6 290 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 PRSS33Q8NF86 280 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 OR2T27Q8NH04 317 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 PAQR8Q8TEZ7 354 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 BORCS5Q969J3 196 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 FRMD6Q96NE9 622 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 C6orf62Q9GZU0 229 aaPredicted RBP20.23■□□□□ 0.83
HOMER3-204ENST00000539827 OCEL1Q9H607 264 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 TMEM185BQ9H7F4 350 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 PTGES2Q9H7Z7 377 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 AKIP1Q9NQ31 210 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 NOX1Q9Y5S8 564 aa20.23■□□□□ 0.83
HOMER3-204ENST00000539827 WDFY3Q8IZQ1 3526 aa20.22■□□□□ 0.83
HOMER3-204ENST00000539827 CDRT1O95170 752 aa20.22■□□□□ 0.83
HOMER3-204ENST00000539827 GTF2E2P29084 291 aaKnown RBP20.22■□□□□ 0.83
HOMER3-204ENST00000539827 IDUAP35475 653 aa20.22■□□□□ 0.83
HOMER3-204ENST00000539827 MELKQ14680 651 aa20.22■□□□□ 0.83
HOMER3-204ENST00000539827 PM20D2Q8IYS1 436 aa20.22■□□□□ 0.83
HOMER3-204ENST00000539827 DACH2Q96NX9 599 aa20.22■□□□□ 0.83
HOMER3-204ENST00000539827 DCLRE1CQ96SD1 692 aaKnown RBP20.22■□□□□ 0.83
HOMER3-204ENST00000539827 MMP27Q9H306 513 aa20.22■□□□□ 0.83
HOMER3-204ENST00000539827 CCDC86Q9H6F5 360 aaKnown RBP20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms