RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 CLCF1Q9UBD9 225 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 POLEQ07864 2286 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 IGHV3-15A0A0B4J1V0 119 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 AQP7P3A6NL99 342 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 VAMP5O95183 116 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 GASTP01350 101 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 CA7P43166 264 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 IL1RL1Q01638 556 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 TSPAN31Q12999 210 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 ZNF770Q6IQ21 691 aaPredicted RBP13.79□□□□□ -0.2
DDB1-216ENST00000539739 OAFQ86UD1 273 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 STK32CQ86UX6 486 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 MEX3DQ86XN8 651 aaKnown RBP13.79□□□□□ -0.2
DDB1-216ENST00000539739 LRRC17Q8N6Y2 441 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 ADPRHL1Q8NDY3 354 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 FEVQ99581 238 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 TM9SF2Q99805 663 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 PSD2Q9BQI7 771 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 DGCR6LQ9BY27 220 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 ZNF556Q9HAH1 456 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 KIF17Q9P2E2 1029 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 OAZ3Q9UMX2 235 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 RASD1Q9Y272 281 aa13.79□□□□□ -0.2
DDB1-216ENST00000539739 SAC3D1A6NKF1 404 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 TRIM64CA6NLI5 447 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 BLOC1S5-TXNDC5H3BN57 136 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 SMAD9O15198 467 aaKnown RBP13.78□□□□□ -0.2
DDB1-216ENST00000539739 SLC22A1O15245 554 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 ADAP00813 363 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 STSP08842 583 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 ADORA3P0DMS8 318 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 M6PRP20645 277 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 GSTM3P21266 225 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 FPR3P25089 353 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 RNPS1Q15287 305 aaKnown RBP13.78□□□□□ -0.2
DDB1-216ENST00000539739 SIGIRRQ6IA17 410 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 TMEM211Q6ICI0 200 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 C3P1Q6ZMU1 363 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 CCDC103Q8IW40 242 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 HS3ST5Q8IZT8 346 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 ATG16L2Q8NAA4 619 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 Q9H521 79 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 KLHL9Q9P2J3 617 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 FAM215AQ9Y5M1 114 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 NOX1Q9Y5S8 564 aa13.78□□□□□ -0.2
DDB1-216ENST00000539739 CFAP46Q8IYW2 2715 aa13.77□□□□□ -0.2
DDB1-216ENST00000539739 UNC119BA6NIH7 251 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 E9PLN8 166 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 PLPP3O14495 311 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 CDC42EP2O14613 210 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 KLF4O43474 513 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 CYTIPO60759 359 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 AQP8O94778 261 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 TGM6O95932 706 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 IL2RAP01589 272 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 POU2F1P14859 743 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 PRKACGP22612 351 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 GNLYP22749 145 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 AHCYP23526 432 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 GSSP48637 474 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 PCYT1AP49585 367 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 PER3P56645 1201 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 PUDPQ08623 228 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 RASGEF1BQ0VAM2 473 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 COX10Q12887 443 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 ZBED5Q49AG3 693 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 RTL6Q6ICC9 239 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 OR2A2Q6IF42 318 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 PLXDC2Q6UX71 529 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 IZUMO2Q6UXV1 221 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 GPAT4Q86UL3 456 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 MINDY2Q8NBR6 621 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 OR51A7Q8NH64 312 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 RNF128Q8TEB7 428 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 GTPBP3Q969Y2 492 aaKnown RBP13.77□□□□□ -0.21
DDB1-216ENST00000539739 VKORC1Q9BQB6 163 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 NEURL2Q9BR09 285 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 C9orf16Q9BUW7 83 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 GLRX2Q9NS18 164 aa13.77□□□□□ -0.21
DDB1-216ENST00000539739 MAGED1Q9Y5V3 778 aaPredicted RBP13.77□□□□□ -0.21
DDB1-216ENST00000539739 TRAV27A0A087WT01 109 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 MBD3L4A6NDZ8 208 aaPredicted RBP13.76□□□□□ -0.21
DDB1-216ENST00000539739 MBD3L3A6NE82 208 aaPredicted RBP13.76□□□□□ -0.21
DDB1-216ENST00000539739 MBD3L5A6NJ08 208 aaPredicted RBP13.76□□□□□ -0.21
DDB1-216ENST00000539739 ZNF701M0R085 212 aaPredicted RBP13.76□□□□□ -0.21
DDB1-216ENST00000539739 RNF13O43567 381 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 PLGP00747 810 aaPredicted RBP13.76□□□□□ -0.21
DDB1-216ENST00000539739 TIMP3P35625 211 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 PRPS1P60891 318 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 PDK3Q15120 406 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 EIF2S3LQ2VIR3 472 aaKnown RBP13.76□□□□□ -0.21
DDB1-216ENST00000539739 ABLIM2Q6H8Q1 611 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 OR13C2Q8NGS9 318 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 MBD3L2Q8NHZ7 208 aaPredicted RBP13.76□□□□□ -0.21
DDB1-216ENST00000539739 ANGPTL6Q8NI99 470 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 PRR7Q8TB68 274 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 OXGR1Q96P68 337 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 GPA33Q99795 319 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 CIB1Q99828 191 aa13.76□□□□□ -0.21
DDB1-216ENST00000539739 TTYH2Q9BSA4 534 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms