RNA–Protein interactions for RNA: ENST00000539712.5

DDB1-215, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,020 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-215ENST00000539712 ZNF43P17038 809 aa14.63□□□□□ -0.07
DDB1-215ENST00000539712 PHYHD1Q5SRE7 291 aa14.63□□□□□ -0.07
DDB1-215ENST00000539712 NANOGP8Q6NSW7 305 aa14.63□□□□□ -0.07
DDB1-215ENST00000539712 WDR88Q6ZMY6 472 aa14.63□□□□□ -0.07
DDB1-215ENST00000539712 ABHD12BQ7Z5M8 362 aaPredicted RBP14.63□□□□□ -0.07
DDB1-215ENST00000539712 OR10A6Q8NH74 314 aa14.63□□□□□ -0.07
DDB1-215ENST00000539712 OR2M2Q96R28 347 aa14.63□□□□□ -0.07
DDB1-215ENST00000539712 TMEM43Q9BTV4 400 aa14.63□□□□□ -0.07
DDB1-215ENST00000539712 EVA1AQ9H8M9 152 aa14.63□□□□□ -0.07
DDB1-215ENST00000539712 NANOGQ9H9S0 305 aa14.63□□□□□ -0.07
DDB1-215ENST00000539712 OBP2BQ9NPH6 170 aa14.63□□□□□ -0.07
DDB1-215ENST00000539712 CBLN4Q9NTU7 201 aa14.63□□□□□ -0.07
DDB1-215ENST00000539712 FGFR1OP2Q9NVK5 253 aa14.63□□□□□ -0.07
DDB1-215ENST00000539712 ARPC4-TTLL3A0A0A6YYG9 625 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 RNF223E7ERA6 249 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 ATP6V1G2-DDX39BF2Z307 99 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 KRT33AO76009 404 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 PCGF2P35227 344 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 ROR2Q01974 943 aaKnown RBP14.62□□□□□ -0.07
DDB1-215ENST00000539712 VEZF1Q14119 521 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 MST1LQ2TV78 715 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 RABL3Q5HYI8 236 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 SWT1Q5T5J6 900 aaKnown RBP14.62□□□□□ -0.07
DDB1-215ENST00000539712 ZNF613Q6PF04 617 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 CALHM3Q86XJ0 350 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 MUC15Q8N387 334 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 MAPK1IP1LQ8NDC0 245 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 ANKK1Q8NFD2 765 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 MAGEE2Q8TD90 523 aaPredicted RBP14.62□□□□□ -0.07
DDB1-215ENST00000539712 MCHR1Q99705 422 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 CACNG6Q9BXT2 260 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 REG4Q9BYZ8 158 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 ALG2Q9H553 416 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 GPR35Q9HC97 309 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 SAR1AQ9NR31 198 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 CRNNQ9UBG3 495 aaPredicted RBP14.62□□□□□ -0.07
DDB1-215ENST00000539712 POU2F3Q9UKI9 436 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 MOKQ9UQ07 419 aa14.62□□□□□ -0.07
DDB1-215ENST00000539712 ARFGEF3Q5TH69 2177 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 CR1P17927 2039 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 A0A096LPE4 126 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 A0A1W2PPZ6 126 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 ZNF503-AS2A6NEH8 195 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 WNT11O96014 354 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 IGLV1-44P01699 117 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 GTF2E2P29084 291 aaKnown RBP14.61□□□□□ -0.07
DDB1-215ENST00000539712 FABP6P51161 128 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 NCALDP61601 193 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 TUBA1BP68363 451 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 TUBA4AP68366 448 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 ARF1P84077 181 aaKnown RBP14.61□□□□□ -0.07
DDB1-215ENST00000539712 SF3A3Q12874 501 aaKnown RBP eCLIP14.61□□□□□ -0.07
DDB1-215ENST00000539712 KLF10Q13118 480 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 TRMT5Q32P41 509 aaKnown RBP14.61□□□□□ -0.07
DDB1-215ENST00000539712 ZNF544Q6NX49 715 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 ANKRD16Q6P6B7 361 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 TUBA1AQ71U36 451 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 CCDC80Q76M96 950 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 RANBP3LQ86VV4 465 aaPredicted RBP14.61□□□□□ -0.07
DDB1-215ENST00000539712 SCAIQ8N9R8 606 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 LRRC58Q96CX6 371 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 TXNDC15Q96J42 360 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 ZNF317Q96PQ6 595 aaPredicted RBP14.61□□□□□ -0.07
DDB1-215ENST00000539712 SEC61A2Q9H9S3 476 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 MRPL39Q9NYK5 338 aaKnown RBP14.61□□□□□ -0.07
DDB1-215ENST00000539712 SLC13A4Q9UKG4 626 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 CORINQ9Y5Q5 1042 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 ATP23Q9Y6H3 246 aa14.61□□□□□ -0.07
DDB1-215ENST00000539712 A0A096LNT2 108 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 PLPP3O14495 311 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 SLC43A1O75387 559 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 SH3BGRP55822 239 aaPredicted RBP14.6□□□□□ -0.07
DDB1-215ENST00000539712 C1DQ13901 141 aaKnown RBP14.6□□□□□ -0.07
DDB1-215ENST00000539712 MFSD13AQ14CX5 517 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 SWI5Q1ZZU3 235 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 VMACQ2NL98 169 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 ENTPD8Q5MY95 495 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 HMBOX1Q6NT76 420 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 KLHL24Q6TFL4 600 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 PATL1Q86TB9 770 aaKnown RBP14.6□□□□□ -0.07
DDB1-215ENST00000539712 MYPOPQ86VE0 399 aaPredicted RBP14.6□□□□□ -0.07
DDB1-215ENST00000539712 SLC30A8Q8IWU4 369 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 C20orf196Q8IYI0 205 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 FBXL14Q8N1E6 418 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 DEPDC4Q8N2C3 294 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 FAM169BQ8N8A8 192 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 RNF217Q8TC41 542 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 HTRA1Q92743 480 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 SLC38A2Q96QD8 506 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 EPYCQ99645 322 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 ZNF426Q9BUY5 554 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 PCDHAC1Q9H158 963 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 FKRPQ9H9S5 495 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 CRLF2Q9HC73 371 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 USP22Q9UPT9 525 aa14.6□□□□□ -0.07
DDB1-215ENST00000539712 FBN1P35555 2871 aaKnown RBP14.6□□□□□ -0.07
DDB1-215ENST00000539712 CPSF4LA6NMK7 179 aaKnown RBP14.59□□□□□ -0.07
DDB1-215ENST00000539712 H7C417 338 aa14.59□□□□□ -0.07
DDB1-215ENST00000539712 CHP2O43745 196 aa14.59□□□□□ -0.07
DDB1-215ENST00000539712 SSX4O60224 188 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms