RNA–Protein interactions for RNA: ENST00000539436.5

TRPT1-207, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 1,726 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-207ENST00000539436 NEIL3Q8TAT5 605 aa17.14■□□□□ 0.33
TRPT1-207ENST00000539436 ADGRG7Q96K78 797 aa17.14■□□□□ 0.33
TRPT1-207ENST00000539436 UCN2Q96RP3 112 aa17.14■□□□□ 0.33
TRPT1-207ENST00000539436 HINT3Q9NQE9 182 aaKnown RBP17.14■□□□□ 0.33
TRPT1-207ENST00000539436 LHX6Q9UPM6 363 aa17.14■□□□□ 0.33
TRPT1-207ENST00000539436 RIIAD1A6NNX1 92 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 ARPC3O15145 178 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 FAM20BO75063 409 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 FZD7O75084 574 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 CSNK2A1P68400 391 aaPredicted RBP17.13■□□□□ 0.33
TRPT1-207ENST00000539436 PIGFQ07326 219 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.13■□□□□ 0.33
TRPT1-207ENST00000539436 ZP4Q12836 540 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 CRMP1Q14194 572 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 NADK2Q4G0N4 442 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 TMEM225Q6GV28 225 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 PLBD1Q6P4A8 553 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 ESPNLQ6ZVH7 1005 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 LSM14AQ8ND56 463 aaKnown RBP17.13■□□□□ 0.33
TRPT1-207ENST00000539436 BBS1Q8NFJ9 593 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 OR10D3Q8NH80 312 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 OR2V1Q8NHB1 315 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 ZNF582Q96NG8 517 aaPredicted RBP17.13■□□□□ 0.33
TRPT1-207ENST00000539436 ARHGAP9Q9BRR9 750 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 HCAR1Q9BXC0 346 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 NDEL1Q9GZM8 345 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 KLHL13Q9P2N7 655 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 GRHPRQ9UBQ7 328 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 ENPP1P22413 925 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 SDHAP31040 664 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 CLDN18P56856 261 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 ITGADQ13349 1161 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 MELKQ14680 651 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 ACKR1Q16570 336 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 C3AR1Q16581 482 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 OCLNQ16625 522 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 CXXC5Q7LFL8 322 aaKnown RBP17.13■□□□□ 0.33
TRPT1-207ENST00000539436 GPAT4Q86UL3 456 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 SLC37A3Q8NCC5 494 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 ANKK1Q8NFD2 765 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 ZPLD1Q8TCW7 415 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 PTP4A1Q93096 173 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 ZNF845Q96IR2 970 aaPredicted RBP17.13■□□□□ 0.33
TRPT1-207ENST00000539436 NMNAT3Q96T66 252 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 YTHDF1Q9BYJ9 559 aaKnown RBP17.13■□□□□ 0.33
TRPT1-207ENST00000539436 ZNF696Q9H7X3 374 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 PAK1IP1Q9NWT1 392 aaPredicted RBP17.13■□□□□ 0.33
TRPT1-207ENST00000539436 B3GAT1Q9P2W7 334 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 SPRR3Q9UBC9 169 aa17.13■□□□□ 0.33
TRPT1-207ENST00000539436 AQP7P3A6NL99 342 aa17.12■□□□□ 0.33
TRPT1-207ENST00000539436 NPIPA5E9PKD4 350 aa17.12■□□□□ 0.33
TRPT1-207ENST00000539436 ZNHIT1O43257 154 aa17.12■□□□□ 0.33
TRPT1-207ENST00000539436 EEF1B2P24534 225 aaKnown RBP17.12■□□□□ 0.33
TRPT1-207ENST00000539436 CDKN2AP42771 156 aaKnown RBP17.12■□□□□ 0.33
TRPT1-207ENST00000539436 CXCR4P61073 352 aa17.12■□□□□ 0.33
TRPT1-207ENST00000539436 H3F3AP84243 136 aa17.12■□□□□ 0.33
TRPT1-207ENST00000539436 POU3F1Q03052 451 aaPredicted RBP17.12■□□□□ 0.33
TRPT1-207ENST00000539436 TMEM201Q5SNT2 666 aa17.12■□□□□ 0.33
TRPT1-207ENST00000539436 AADACL4Q5VUY2 407 aa17.12■□□□□ 0.33
TRPT1-207ENST00000539436 PAQR6Q6TCH4 344 aa17.12■□□□□ 0.33
TRPT1-207ENST00000539436 TXNDC15Q96J42 360 aa17.12■□□□□ 0.33
TRPT1-207ENST00000539436 FN3KQ9H479 309 aa17.12■□□□□ 0.33
TRPT1-207ENST00000539436 NPIPA1Q9UND3 350 aa17.12■□□□□ 0.33
TRPT1-207ENST00000539436 NCOR2Q9Y618 2525 aa17.12■□□□□ 0.33
TRPT1-207ENST00000539436 MGAQ8IWI9 3026 aa17.12■□□□□ 0.33
TRPT1-207ENST00000539436 A0A1W2PRG6 482 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 PRR23D1E9PI22 279 aaPredicted RBP17.11■□□□□ 0.33
TRPT1-207ENST00000539436 H7C1C5 153 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 IDH3BO43837 385 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 IFNGP01579 166 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 CCDC159P0C7I6 412 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 PRR23D2P0DMB1 279 aaPredicted RBP17.11■□□□□ 0.33
TRPT1-207ENST00000539436 CLUP10909 449 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 APEHP13798 732 aaKnown RBP17.11■□□□□ 0.33
TRPT1-207ENST00000539436 IFNGR1P15260 489 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 ZNF708P17019 499 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 ZNF3P17036 446 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 ACVR2AP27037 513 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 ACVR1BP36896 505 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 RAC3P60763 192 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 RPL27P61353 136 aaKnown RBP17.11■□□□□ 0.33
TRPT1-207ENST00000539436 LCN6P62502 163 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 HSF1Q00613 529 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 MESTQ5EB52 335 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 SLC25A30Q5SVS4 291 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 VASNQ6EMK4 673 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 LEG1Q6P5S2 330 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 PLXDC2Q6UX71 529 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 WDFY1Q8IWB7 410 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 ZNF540Q8NDQ6 660 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 C9orf43Q8TAL5 461 aaPredicted RBP17.11■□□□□ 0.33
TRPT1-207ENST00000539436 ROBO4Q8WZ75 1007 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 ZNF566Q969W8 418 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 Q96MT0 163 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 TIMP4Q99727 224 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 NAA11Q9BSU3 229 aaPredicted RBP17.11■□□□□ 0.33
TRPT1-207ENST00000539436 TXNIPQ9H3M7 391 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 MED29Q9NX70 200 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 SCN3BQ9NY72 215 aa17.11■□□□□ 0.33
TRPT1-207ENST00000539436 KLHL21Q9UJP4 597 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms