RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 ZNF511Q8NB15 262 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 LILRB4Q8NHJ6 448 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 ASB17Q8WXJ9 295 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 ZNF775Q96BV0 537 aaPredicted RBP13.43□□□□□ -0.26
CACNB1-206ENST00000539338 SMLR1H3BR10 107 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 SCRG1O75711 98 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 FAM57BQ71RH2 274 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 FOXRED1Q96CU9 486 aaPredicted RBP13.43□□□□□ -0.26
CACNB1-206ENST00000539338 CHST8Q9H2A9 424 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 DHCR7Q9UBM7 475 aaKnown RBP13.43□□□□□ -0.26
CACNB1-206ENST00000539338 TCRBV5S2A0A599 114 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 IGHG1P01857 330 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 S100A12P80511 92 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 PFN4Q8NHR9 129 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 PAQR8Q8TEZ7 354 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 ZNF436Q9C0F3 470 aaPredicted RBP13.43□□□□□ -0.26
CACNB1-206ENST00000539338 NOX4Q9NPH5 578 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 PRR33A8MZF0 331 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 IGLV3-27P01718 113 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 CHRM4P08173 479 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 HOXB5P09067 269 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 RPL35P42766 123 aaKnown RBP13.43□□□□□ -0.26
CACNB1-206ENST00000539338 SLC6A12P48065 614 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 BDH1Q02338 343 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 OR4M1Q8NGD0 313 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 PDXPQ96GD0 296 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 SORCS2Q96PQ0 1159 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 CDH20Q9HBT6 801 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 UGT2A1Q9Y4X1 527 aa13.43□□□□□ -0.26
CACNB1-206ENST00000539338 BLACEA4D250 179 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 LRIT2A6NDA9 550 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 PKLRP30613 574 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 TGFBR1P36897 503 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 ETV5P41161 510 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 SEC61A1P61619 476 aaKnown RBP13.42□□□□□ -0.26
CACNB1-206ENST00000539338 TNK1Q13470 666 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 TECPR1Q7Z6L1 1165 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 ZNF546Q86UE3 836 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 FABP7O15540 132 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 AGFG2O95081 481 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 RAC2P15153 192 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 PSMB1P20618 241 aaKnown RBP13.42□□□□□ -0.26
CACNB1-206ENST00000539338 SLC9A3R2Q15599 337 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 TRAPPC6BQ86SZ2 158 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 LRRC18Q8N456 261 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 TMPRSS11EQ9UL52 423 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 COPS3Q9UNS2 423 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 DCAF7P61962 342 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 SNRPGP62308 76 aaKnown RBP13.42□□□□□ -0.26
CACNB1-206ENST00000539338 RBM39Q14498 530 aaKnown RBP13.42□□□□□ -0.26
CACNB1-206ENST00000539338 METRNLQ641Q3 311 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 CMTM1Q8IZ96 169 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 OR13C9Q8NGT0 318 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 BCL7CQ8WUZ0 217 aaPredicted RBP13.42□□□□□ -0.26
CACNB1-206ENST00000539338 C1QTNF3Q9BXJ4 246 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 TIMM8BQ9Y5J9 83 aaPredicted RBP13.42□□□□□ -0.26
CACNB1-206ENST00000539338 FXYD1O00168 92 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 ZFAND5O76080 213 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 MT-CO3P00414 261 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 APEHP13798 732 aaKnown RBP13.42□□□□□ -0.26
CACNB1-206ENST00000539338 VEGFCP49767 419 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 SYT14P1Q58G82 188 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 ALKAL2Q6UX46 152 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 ESPNLQ6ZVH7 1005 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 SIAH3Q8IW03 269 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 ZNF679Q8IYX0 411 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 RASD2Q96D21 266 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 SLC6A18Q96N87 628 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 NDRG4Q9ULP0 352 aaKnown RBP13.42□□□□□ -0.26
CACNB1-206ENST00000539338 LOXL2Q9Y4K0 774 aa13.42□□□□□ -0.26
CACNB1-206ENST00000539338 TNRC6CQ9HCJ0 1690 aaKnown RBP13.41□□□□□ -0.26
CACNB1-206ENST00000539338 SIGLEC6O43699 453 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 CCR6P51684 374 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 CLDN6P56747 220 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 RRAS2P62070 204 aaPredicted RBP13.41□□□□□ -0.26
CACNB1-206ENST00000539338 MELKQ14680 651 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 FCN2Q15485 313 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 DEFB109BQ30KR1 87 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 NKAIN2Q5VXU1 208 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 ZNF529Q6P280 563 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 COMTD1Q86VU5 262 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 SULF2Q8IWU5 870 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 OR7G1Q8NGA0 311 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 SLC41A2Q96JW4 573 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 OR5B12Q96R08 314 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 VN1R3Q9BXE9 311 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 MCTS1Q9ULC4 181 aaKnown RBP13.41□□□□□ -0.26
CACNB1-206ENST00000539338 TARM1B6A8C7 271 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 HMGN4O00479 90 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 KLK8O60259 260 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 UTS2O95399 124 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 CHRNB1P11230 501 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 TPT1P13693 172 aaKnown RBP13.41□□□□□ -0.26
CACNB1-206ENST00000539338 TMEM176BQ3YBM2 270 aaPredicted RBP13.41□□□□□ -0.26
CACNB1-206ENST00000539338 Q499Y3 187 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 TRMT12Q53H54 448 aaKnown RBP13.41□□□□□ -0.26
CACNB1-206ENST00000539338 PAQR6Q6TCH4 344 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 TMEM179BQ7Z7N9 219 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 OR1S1Q8NH92 325 aa13.41□□□□□ -0.26
CACNB1-206ENST00000539338 MKRN2Q9H000 416 aaKnown RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms