RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 KLF9Q13886 244 aaPredicted RBP6.32□□□□□ -1.4
SCAPER-203ENST00000538941 SFRP5Q5T4F7 317 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 SLC18B1Q6NT16 456 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 UNQ6126/PRO20091Q6UXV3 157 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 NDUFAF7Q7L592 441 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 TSEN54Q7Z6J9 526 aaKnown RBP6.32□□□□□ -1.4
SCAPER-203ENST00000538941 C2CD4CQ8TF44 421 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 MIB2Q96AX9 1013 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 ZDHHC5Q9C0B5 715 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 SMCO4Q9NRQ5 59 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 ATG4BQ9Y4P1 393 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 OR1A2Q9Y585 309 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 MYO16Q9Y6X6 1858 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 MAN2B1O00754 1011 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 ZNF208O43345 1280 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 CBX7O95931 251 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 SFTPBP07988 381 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 THBS1P07996 1170 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 RAB4AP20338 218 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 CNR1P21554 472 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 ACHEP22303 614 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 RBMXP38159 391 aaKnown RBP6.32□□□□□ -1.4
SCAPER-203ENST00000538941 WASP42768 502 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 NR0B1P51843 470 aaKnown RBP6.32□□□□□ -1.4
SCAPER-203ENST00000538941 CSNK1G2P78368 415 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 ALKBH1Q13686 389 aaKnown RBP6.32□□□□□ -1.4
SCAPER-203ENST00000538941 PAN3Q58A45 887 aaKnown RBP6.32□□□□□ -1.4
SCAPER-203ENST00000538941 ALG10Q5BKT4 473 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 FAM74A1Q5RGS3 127 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 ACOT7LQ6ZUV0 252 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 SSX6Q7RTT6 188 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 PHOSPHO1Q8TCT1 267 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 DVL3Q92997 716 aaPredicted RBP6.32□□□□□ -1.4
SCAPER-203ENST00000538941 SEC22AQ96IW7 307 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 HHIPL1Q96JK4 782 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 PBDC1Q9BVG4 233 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 SLCO5A1Q9H2Y9 848 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 CLDND1Q9NY35 253 aa6.32□□□□□ -1.4
SCAPER-203ENST00000538941 TCRBV16S1A1N1A0A5B0 115 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 PRAMEF25A6NGN4 478 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 PYCARD-AS1I3L0S3 204 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 BCL2L11O43521 198 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 TSPAN15O95858 294 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 HOXD4P09016 255 aaPredicted RBP6.31□□□□□ -1.4
SCAPER-203ENST00000538941 GABRA1P14867 456 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 TYRP1P17643 537 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 RAB5CP51148 216 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 CRYBA2P53672 197 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 ABHD17CQ6PCB6 329 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 TMEM88Q6PEY1 159 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 RHOUQ7L0Q8 258 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 ZFP82Q8N141 532 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 SLC16A11Q8NCK7 471 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 BPIFCQ8NFQ6 507 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 TMEM106AQ96A25 262 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 TMEM41AQ96HV5 264 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 C5orf34Q96MH7 638 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 ORAI3Q9BRQ5 295 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 CREBZFQ9NS37 354 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 CENPMQ9NSP4 180 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 ZFP57Q9NU63 452 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.31□□□□□ -1.4
SCAPER-203ENST00000538941 A0A0B4J2A0 478 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 LRIT2A6NDA9 550 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 WASH3PC4AMC7 463 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 SELENOFO60613 162 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 F3P13726 295 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 CPMP14384 443 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 TSFMP43897 325 aaKnown RBP6.31□□□□□ -1.4
SCAPER-203ENST00000538941 HMGN3Q15651 99 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 Q6ZNB5 142 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 INTS14Q96SY0 518 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 NMNAT3Q96T66 252 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 NPAS1Q99742 590 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 ALG12Q9BV10 488 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 CXXC1Q9P0U4 656 aaPredicted RBP6.31□□□□□ -1.4
SCAPER-203ENST00000538941 PPP4R1LQ9P1A2 415 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 EPHA6Q9UF33 1036 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 SHPKQ9UHJ6 478 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 MOKQ9UQ07 419 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 TMEM72A0PK05 275 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 OR5H14A6NHG9 310 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 TSTD3H0UI37 97 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 AGPAT2O15120 278 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 ABLIM3O94929 683 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 MPC2O95563 127 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 GAAP10253 952 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 IL12BP29460 328 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 ACTR1BP42025 376 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 RAB13P51153 203 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 ACTR1AP61163 376 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 ZNF616Q08AN1 781 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 MPPED2Q15777 294 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 CDKN3Q16667 212 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 ARHGAP11BQ3KRB8 267 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 NHLRC1Q6VVB1 395 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 DPY19L2P2Q6ZN68 376 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 ZNF600Q6ZNG1 722 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 NUP54Q7Z3B4 507 aa6.31□□□□□ -1.4
SCAPER-203ENST00000538941 CD163Q86VB7 1156 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms