RNA–Protein interactions for RNA: ENST00000538253.5

PTPN22-211, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

TSL 1 (best) BASIC

Gene PTPN22, Length 3,575 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-211ENST00000538253 SSC4DQ8WTU2 575 aa3.24□□□□□ -1.89
PTPN22-211ENST00000538253 FAM222BQ8WU58 562 aa3.24□□□□□ -1.89
PTPN22-211ENST00000538253 PTP4A1Q93096 173 aa3.24□□□□□ -1.89
PTPN22-211ENST00000538253 UTP4Q969X6 686 aaKnown RBP3.24□□□□□ -1.89
PTPN22-211ENST00000538253 MARVELD3Q96A59 401 aa3.24□□□□□ -1.89
PTPN22-211ENST00000538253 CCDC124Q96CT7 223 aaKnown RBP3.24□□□□□ -1.89
PTPN22-211ENST00000538253 RCN3Q96D15 328 aa3.24□□□□□ -1.89
PTPN22-211ENST00000538253 PRRC1Q96M27 445 aa3.24□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF184Q99676 751 aaPredicted RBP3.24□□□□□ -1.89
PTPN22-211ENST00000538253 MCHR1Q99705 422 aa3.24□□□□□ -1.89
PTPN22-211ENST00000538253 BTBD10Q9BSF8 475 aa3.24□□□□□ -1.89
PTPN22-211ENST00000538253 TRAF4Q9BUZ4 470 aaPredicted RBP3.24□□□□□ -1.89
PTPN22-211ENST00000538253 PAPOLGQ9BWT3 736 aaKnown RBP3.24□□□□□ -1.89
PTPN22-211ENST00000538253 KAT8Q9H7Z6 458 aaKnown RBP3.24□□□□□ -1.89
PTPN22-211ENST00000538253 REEP1Q9H902 201 aa3.24□□□□□ -1.89
PTPN22-211ENST00000538253 NANOGQ9H9S0 305 aa3.24□□□□□ -1.89
PTPN22-211ENST00000538253 CHMP1AQ9HD42 196 aaPredicted RBP3.24□□□□□ -1.89
PTPN22-211ENST00000538253 MED17Q9NVC6 651 aa3.24□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF226Q9NYT6 803 aa3.24□□□□□ -1.89
PTPN22-211ENST00000538253 PLA2G3Q9NZ20 509 aa3.24□□□□□ -1.89
PTPN22-211ENST00000538253 PCDHB14Q9Y5E9 798 aa3.24□□□□□ -1.89
PTPN22-211ENST00000538253 A0A0U1RQV5 110 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 NPIPB9F8W1W9 429 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 HMGN4O00479 90 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 SMAD9O15198 467 aaKnown RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 SLC19A2O60779 497 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 SLC43A1O75387 559 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 B3GALT4O96024 378 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 HRGP04196 525 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 LCKP06239 509 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ERCC1P07992 297 aaPredicted RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 BMP7P18075 431 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 RPS4Y1P22090 263 aaKnown RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 PAICSP22234 425 aaKnown RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 PTAFRP25105 342 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ARRB2P32121 409 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 CD79BP40259 229 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 PCBD1P61457 104 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 RPS23P62266 143 aaKnown RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 FAM69AQ5T7M9 428 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 VASNQ6EMK4 673 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ADNP2Q6IQ32 1131 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 FIGNL1Q6PIW4 674 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 PIWIL3Q7Z3Z3 882 aaKnown RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 MARCH9Q86YJ5 346 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 ZNF100Q8IYN0 542 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 CLECL1Q8IZS7 167 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 SVOPLQ8N434 492 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 OR10Q1Q8NGQ4 319 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 NFKBIDQ8NI38 313 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 LIPHQ8WWY8 451 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 PIK3R3Q92569 461 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 SGTBQ96EQ0 304 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 TREX2Q9BQ50 279 aaPredicted RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 DCLRE1BQ9H816 532 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 AKIRIN1Q9H9L7 192 aaPredicted RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 FKRPQ9H9S5 495 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 SERHLQ9NQF3 203 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 AASSQ9UDR5 926 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 KCNG2Q9UJ96 466 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 PACSIN3Q9UKS6 424 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 AMDHD2Q9Y303 409 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 UGT2A1Q9Y4X1 527 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 CLDN16Q9Y5I7 305 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 AHCTF1Q8WYP5 2266 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 TMED7-TICAM2A0A0A6YYA0 188 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 LOC102725191A0A1B0GVB3 256 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 IRGMA1A4Y4 181 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 CCL21O00585 134 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 IMPA2O14732 288 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 MITFO75030 526 aaPredicted RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 CLDN14O95500 239 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 FABP3P05413 133 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 H1F0P07305 194 aaKnown RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 CT62P0C5K7 136 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 TMIGD3P0DMS9 266 aaPredicted RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 CCL3P10147 92 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 IFI30P13284 250 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 COX6B1P14854 86 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 GPX4P36969 197 aaPredicted RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 KIR3DL2P43630 455 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 RPL5P46777 297 aaKnown RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 DNASE1L1P49184 302 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 RAD23AP54725 363 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 UGT2B15P54855 530 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 OR2B6P58173 313 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 SELENOVP59797 346 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 SELENOWP63302 87 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 TLE1Q04724 770 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 Q0VFX4 171 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 CAMK2DQ13557 499 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 CYBRD1Q53TN4 286 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 EMC4Q5J8M3 183 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 PDZK1Q5T2W1 519 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 GLYATQ6IB77 296 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 SPINK14Q6IE38 97 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 TYW3Q6IPR3 259 aaKnown RBP3.23□□□□□ -1.89
PTPN22-211ENST00000538253 FRRS1Q6ZNA5 592 aa3.23□□□□□ -1.89
PTPN22-211ENST00000538253 TMPPEQ6ZT21 453 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 89.3 ms