RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 IMPA2O14732 288 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 RCBTB2O95199 551 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 GPX2P18283 190 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 MAKP20794 623 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 SLC6A8P48029 635 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 ELF3P78545 371 aaPredicted RBP6.51□□□□□ -1.37
MSH6-209ENST00000538136 MXD1Q05195 221 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 ACKR1Q16570 336 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 C4orf17Q53FE4 359 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 RNASE12Q5GAN4 147 aaKnown RBP6.51□□□□□ -1.37
MSH6-209ENST00000538136 FAM69AQ5T7M9 428 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 ARL9Q6T311 187 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 ZER1Q7Z7L7 766 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 ZCCHC24Q8N2G6 241 aaKnown RBP6.51□□□□□ -1.37
MSH6-209ENST00000538136 ZNF610Q8N9Z0 462 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 SFXN5Q8TD22 340 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 ELP5Q8TE02 316 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 TSEN15Q8WW01 171 aaKnown RBP6.51□□□□□ -1.37
MSH6-209ENST00000538136 MS4A3Q96HJ5 214 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 RDH12Q96NR8 316 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 TIMP4Q99727 224 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 TTYH2Q9BSA4 534 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 CCDC134Q9H6E4 229 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 FANCFQ9NPI8 374 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 GNG8Q9UK08 70 aa6.51□□□□□ -1.37
MSH6-209ENST00000538136 CDHR4A6H8M9 788 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 ANKRD61A6NGH8 418 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 MYL12BO14950 172 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 RGS5O15539 181 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 RAB36O95755 333 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 FADS2O95864 444 aaKnown RBP6.5□□□□□ -1.37
MSH6-209ENST00000538136 GASTP01350 101 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 SFTPCP11686 197 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 HTR5AP47898 357 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 IQCCQ4KMZ1 466 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 DPY19L4Q7Z388 723 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 YIPF7Q8N8F6 280 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 ANKK1Q8NFD2 765 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 TAAR8Q969N4 342 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 RASSF4Q9H2L5 321 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 DCLRE1BQ9H816 532 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 ASH2LQ9UBL3 628 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 LAMP3Q9UQV4 416 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 OBSL1O75147 1896 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 OR6C65A6NJZ3 312 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 BCKDKO14874 412 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 MPZL1O95297 269 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 PNMTP11086 282 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 FCGR1AP12314 374 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 ZNF3P17036 446 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 SLC6A6P31641 620 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 PCGF2P35227 344 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 EIF1P41567 113 aaKnown RBP6.5□□□□□ -1.37
MSH6-209ENST00000538136 POU3F4P49335 361 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 CDH11P55287 796 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 OR12D2P58182 307 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 FOXF2Q12947 444 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 DDI2Q5TDH0 399 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 HIPK1Q86Z02 1210 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 OR4D11Q8NGI4 311 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 CNIH3Q8TBE1 160 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 PMM1Q92871 262 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 GATA6Q92908 595 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 LRR1Q96L50 414 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 NIPSNAP1Q9BPW8 284 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 C9orf16Q9BUW7 83 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 PRRG3Q9BZD7 231 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 PAPOLBQ9NRJ5 636 aaKnown RBP6.5□□□□□ -1.37
MSH6-209ENST00000538136 DNAJB9Q9UBS3 223 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 NKX1-2Q9UD57 310 aaPredicted RBP6.5□□□□□ -1.37
MSH6-209ENST00000538136 COA3Q9Y2R0 106 aaPredicted RBP6.5□□□□□ -1.37
MSH6-209ENST00000538136 DAPL1A0PJW8 107 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 ALG1L2C9J202 215 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 ZNF587BE7ETH6 402 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 HNRNPRO43390 633 aaKnown RBP6.5□□□□□ -1.37
MSH6-209ENST00000538136 ABHD16AO95870 558 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 IGKV3-11P04433 115 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 ZFP36L2P47974 494 aaKnown RBP6.5□□□□□ -1.37
MSH6-209ENST00000538136 CLK1P49759 484 aaKnown RBP6.5□□□□□ -1.37
MSH6-209ENST00000538136 SUCLG1P53597 346 aaKnown RBP6.5□□□□□ -1.37
MSH6-209ENST00000538136 KRR1Q13601 381 aaKnown RBP6.5□□□□□ -1.37
MSH6-209ENST00000538136 CRMP1Q14194 572 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 THSD4Q6ZMP0 1018 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 ATG4DQ86TL0 474 aaPredicted RBP6.5□□□□□ -1.37
MSH6-209ENST00000538136 ZNF676Q8N7Q3 588 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 WDSUB1Q8N9V3 476 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 GPR32P1Q8NGA4 272 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 OR9K2Q8NGE7 335 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 NRGNQ92686 78 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 ADIPOR1Q96A54 375 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 STACQ99469 402 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 S100A13Q99584 98 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 LRMDAQ9H2I8 198 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 CLK4Q9HAZ1 481 aaKnown RBP6.5□□□□□ -1.37
MSH6-209ENST00000538136 S100A14Q9HCY8 104 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 TAS2R7Q9NYW3 318 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 PRSS50Q9UI38 385 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 LAMP5Q9UJQ1 280 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 MOKQ9UQ07 419 aa6.5□□□□□ -1.37
MSH6-209ENST00000538136 AP3M1Q9Y2T2 418 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms