RNA–Protein interactions for RNA: ENST00000537408.1

CLSTN3-207, Transcript of calsyntenin 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN3, Length 4,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-207ENST00000537408 ZFYVE1Q9HBF4 777 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 KCND3Q9UK17 655 aa10.03□□□□□ -0.8
CLSTN3-207ENST00000537408 PRR33A8MZF0 331 aa10.02□□□□□ -0.8
CLSTN3-207ENST00000537408 PYCARD-AS1I3L0S3 204 aa10.02□□□□□ -0.8
CLSTN3-207ENST00000537408 TIMP2P16035 220 aa10.02□□□□□ -0.8
CLSTN3-207ENST00000537408 FGF7P21781 194 aa10.02□□□□□ -0.8
CLSTN3-207ENST00000537408 AKT2P31751 481 aa10.02□□□□□ -0.8
CLSTN3-207ENST00000537408 RPS10P46783 165 aaKnown RBP10.02□□□□□ -0.8
CLSTN3-207ENST00000537408 NKX6-1P78426 367 aaPredicted RBP10.02□□□□□ -0.8
CLSTN3-207ENST00000537408 INPP5JQ15735 1006 aaPredicted RBP10.02□□□□□ -0.8
CLSTN3-207ENST00000537408 ACTBL2Q562R1 376 aa10.02□□□□□ -0.8
CLSTN3-207ENST00000537408 HENMT1Q5T8I9 393 aaKnown RBP10.02□□□□□ -0.8
CLSTN3-207ENST00000537408 SCD5Q86SK9 330 aa10.02□□□□□ -0.8
CLSTN3-207ENST00000537408 CCDC54Q8NEL0 328 aa10.02□□□□□ -0.8
CLSTN3-207ENST00000537408 OR5W2Q8NH69 310 aa10.02□□□□□ -0.8
CLSTN3-207ENST00000537408 PPCDCQ96CD2 204 aa10.02□□□□□ -0.8
CLSTN3-207ENST00000537408 MESP1Q9BRJ9 268 aa10.02□□□□□ -0.8
CLSTN3-207ENST00000537408 DYRK1BQ9Y463 629 aa10.02□□□□□ -0.8
CLSTN3-207ENST00000537408 ELOA3CA0A087WX78 387 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 ZNF587BE7ETH6 402 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 PRPH2P23942 346 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 WNT3P56703 355 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 NAE1Q13564 534 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 DCAF12L2Q5VW00 463 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 ZDHHC20Q5W0Z9 365 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 LPCAT3Q6P1A2 487 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 ESPNLQ6ZVH7 1005 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 HIST2H3AQ71DI3 136 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 ANGPTL5Q86XS5 388 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 HORMAD2Q8N7B1 307 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 UBTD2Q8WUN7 234 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 MALSU1Q96EH3 234 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 MICU1Q9BPX6 476 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 NDC1Q9BTX1 674 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 CHST8Q9H2A9 424 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 TMEM38AQ9H6F2 299 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 ZMIZ1Q9ULJ6 1067 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 FAM96BQ9Y3D0 163 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 SMCO3A2RU48 225 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 FGF16O43320 207 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 F11P03951 625 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 IGFBP6P24592 240 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 AKR1C3P42330 323 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 IRF8Q02556 426 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 SCGB2B2Q4G0G5 96 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 TMEM69Q5SWH9 247 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 ACSM5Q6NUN0 579 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 SBSNQ6UWP8 590 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 NR2C2APQ86WQ0 139 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 TRAPPC5Q8IUR0 188 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 HAVCR2Q8TDQ0 301 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 VOPP1Q96AW1 172 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 NDUFAF3Q9BU61 184 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 JAM3Q9BX67 310 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 TPSD1Q9BZJ3 242 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 RIMS4Q9H426 269 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 FN3KRPQ9HA64 309 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 TNFSF18Q9UNG2 199 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 RP1L1Q8IWN7 2480 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 SIP14410 1827 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 DAPL1A0PJW8 107 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 ANKRD20A5PA0PJZ0 165 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 OR5H14A6NHG9 310 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 TAPBPO15533 448 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 GMFGO60234 142 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 RHEBQ15382 184 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 LRRC37A5PQ49AS3 106 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 AARDQ4LEZ3 155 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 RD3Q7Z3Z2 195 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 RANBP3LQ86VV4 465 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 MUC20Q8N307 709 aaPredicted RBP10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 ACBD7Q8N6N7 88 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 POGLUT1Q8NBL1 392 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 STEAP2Q8NFT2 490 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 ATG5Q9H1Y0 275 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 OR52A5Q9H2C5 316 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 PTGES2Q9H7Z7 377 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 MMACHCQ9Y4U1 282 aa10.02□□□□□ -0.81
CLSTN3-207ENST00000537408 MKRN2OSH3BPM6 223 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 ZNF749O43361 778 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 GCM2O75603 506 aaPredicted RBP10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 LINC00614P0C842 121 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 MECP2P51608 486 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 UBE2MP61081 183 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 CTSL3PQ5NE16 218 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 KHDRBS2Q5VWX1 349 aaKnown RBP10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 C11orf87Q6NUJ2 197 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 POC1BQ8TC44 478 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 LGALS14Q8TCE9 139 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 FGF14Q92915 247 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 ECHDC3Q96DC8 303 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 LAT2Q9GZY6 243 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 TRPV4Q9HBA0 871 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 CSNK1G1Q9HCP0 422 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 ACKR4Q9NPB9 350 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 CYP8B1Q9UNU6 501 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 NME7Q9Y5B8 376 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 MFNGO00587 321 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 STC2O76061 302 aa10.01□□□□□ -0.81
CLSTN3-207ENST00000537408 ELFN1P0C7U0 828 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms