RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 TRMT61AQ96FX7 289 aaKnown RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 SLC12A9Q9BXP2 914 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 PARP12Q9H0J9 701 aaKnown RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 NRXN2Q9P2S2 1712 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 A0A087WZY1 265 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 BCL2L11O43521 198 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF8P17098 575 aaPredicted RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 ACY1Q03154 408 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 RING1Q06587 406 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 FOXO1Q12778 655 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 GDPD4Q6W3E5 623 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 ESPNLQ6ZVH7 1005 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 HPSE2Q8WWQ2 592 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 MOAP1Q96BY2 351 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 NME7Q9Y5B8 376 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 TSC2P49815 1807 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 SLC33A1O00400 549 aaPredicted RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 SYT5O00445 386 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 CAV2P51636 162 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 TAS2R38P59533 333 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 DCDP81605 110 aaKnown RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 C9orf152Q5JTZ5 239 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 ACOT7LQ6ZUV0 252 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 CBARPQ8N350 705 aaPredicted RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 BPIFB2Q8N4F0 458 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 RASGEF1AQ8N9B8 481 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 DMBX1Q8NFW5 382 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 ARRDC2Q8TBH0 407 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 TFGQ92734 400 aaPredicted RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 MOGAT1Q96PD6 335 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 ORAI3Q9BRQ5 295 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 FN3KRPQ9HA64 309 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 MYOZ1Q9NP98 299 aaPredicted RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 B3GAT2Q9NPZ5 323 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 MRPL22Q9NWU5 206 aaKnown RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 ELOVL2Q9NXB9 296 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 MIOXQ9UGB7 285 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 URGCP-MRPS24S4R325 110 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 TSPAN11A1L157 253 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 GAPDHSO14556 408 aaPredicted RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF208O43345 1280 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 CYTIPO60759 359 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 PLGP00747 810 aaPredicted RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 IGHA1P01876 353 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 C6P13671 934 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 SLC2A5P22732 501 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 GNRHRP30968 328 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 SQSTM1Q13501 440 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 PPA1Q15181 289 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 RPE65Q16518 533 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 NXPE4Q6UWF7 544 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 OLIG3Q7RTU3 272 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 AMZ2Q86W34 360 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 VRK2Q86Y07 508 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 KDM8Q8N371 416 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 OR52B4Q8NGK2 314 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 OR1S1Q8NH92 325 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 GHSRQ92847 366 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 MRPS24Q96EL2 167 aaKnown RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 WDR77Q9BQA1 342 aaPredicted RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 SHROOM3Q8TF72 1996 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 A0A0G2JMZ2 1700 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 LRRC37A2A6NM11 1700 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 ELOA3CA0A087WX78 387 aaPredicted RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 ZC3H12DA2A288 527 aaKnown RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 OR2M5A3KFT3 312 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 TMEM235A6NFC5 223 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 BHLHE40O14503 412 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 SUSD5O60279 629 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 MELTFP08582 738 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 IL12BP29460 328 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 TAS2R19P59542 299 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 HERV-K104P61576 105 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 FABP5Q01469 135 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF528Q3MIS6 628 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 Q6ZVL8 140 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 OR11H4Q8NGC9 324 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 OR5H2Q8NGV7 314 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 TAAR9Q96RI9 348 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 POFUT1Q9H488 388 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 PCDHGA9Q9Y5G4 932 aaKnown RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 NPIPA5A0A0B4J1W7 369 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 A0A0U1RQK1 487 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 TCRBV16S1A1N1A0A5B0 115 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 KDM4EB2RXH2 506 aaPredicted RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 NPIPA7E9PJI5 369 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 NPIPA8P0DM63 369 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 HTR1FP30939 366 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 WASP42768 502 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 PCBP3P57721 371 aaKnown RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 HBA1P69905 142 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 RASGEF1BQ0VAM2 473 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF239Q16600 458 aaKnown RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 ETFRF1Q6IPR1 90 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 ZNF770Q6IQ21 691 aaPredicted RBP5□□□□□ -1.61
PTPRD-213ENST00000537002 GRHL2Q6ISB3 625 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 KATNBL1Q9H079 304 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 NRIP3Q9NQ35 241 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 CHST2Q9Y4C5 530 aa5□□□□□ -1.61
PTPRD-213ENST00000537002 NEUROG3Q9Y4Z2 214 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms