RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 POLR2J3Q9H1A7 115 aaKnown RBP15.74■□□□□ 0.11
TNFRSF1A-209ENST00000536717 A0A0B4J2E0 115 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 A0A1B0GX12 115 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 ERICH4A6NGS2 130 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 FTCDNL1E5RQL4 147 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 PDLIM1O00151 329 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 ITGA2P17301 1181 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 TAS2R41P59536 307 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 FOXD4Q12950 439 aaPredicted RBP15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 STK11Q15831 433 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 FAM98BQ52LJ0 330 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 CASP12Q6UXS9 341 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 CYP4Z1Q86W10 505 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 ZIC4Q8N9L1 334 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 WFDC11Q8NEX6 87 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 RNF217Q8TC41 542 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 IGFBPL1Q8WX77 278 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 PIGTQ969N2 578 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 ZNF385AQ96PM9 386 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 CCL19Q99731 98 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 PTDSS2Q9BVG9 487 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 SF3B5Q9BWJ5 86 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 C12orf10Q9HB07 376 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 ASB6Q9NWX5 421 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 FAM32AQ9Y421 112 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 TRAPPC13A5PLN9 417 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 ELOA3DA6NLF2 546 aaPredicted RBP15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 RAD51DO75771 328 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 ITGA5P08648 1049 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 PNMTP11086 282 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 UMPSP11172 480 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 CD99P14209 185 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 CHRNB3Q05901 458 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 FAPQ12884 760 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 PPA1Q15181 289 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 ELOA3BQ3SY89 546 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 TIMM23BQ5SRD1 257 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 SWT1Q5T5J6 900 aaKnown RBP15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 ELOA3Q8NG57 546 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 OR9K2Q8NGE7 335 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 TMEM45BQ96B21 275 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 PRRC1Q96M27 445 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 MAGIXQ9H6Y5 334 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 NGBQ9NPG2 151 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 SLC7A10Q9NS82 523 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 ENPP4Q9Y6X5 453 aa15.73■□□□□ 0.11
TNFRSF1A-209ENST00000536717 DHRS12A0PJE2 317 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 DPRXA6NFQ7 191 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 OR5H1A6NKK0 313 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 FZD7O75084 574 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 OR5F1O95221 314 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 AHSA1O95433 338 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 SEMG1P04279 462 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 FABP3P05413 133 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 RPS5P46782 204 aaKnown RBP15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 CDH12P55289 794 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 PIN1Q13526 163 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 TSPO2Q5TGU0 170 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 GPAT4Q86UL3 456 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 LILRB1Q8NHL6 650 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 MFSD8Q8NHS3 518 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 SLC38A4Q969I6 547 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 KTI12Q96EK9 354 aaPredicted RBP15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 C7orf34Q96L11 122 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 ESRP2Q9H6T0 727 aaKnown RBP15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 IL1RAPQ9NPH3 570 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 PARPBPQ9NWS1 579 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 TAS2R16Q9NYV7 291 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 NPAP1Q9NZP6 1156 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 RNF115Q9Y4L5 304 aa15.72■□□□□ 0.11
TNFRSF1A-209ENST00000536717 IGKV1D-42A0A075B6H8 117 aa15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 hCG_2039718K7EN88 272 aa15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 HS3ST1O14792 307 aa15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 CHP2O43745 196 aa15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 NQO1P15559 274 aaKnown RBP15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 HOXB6P17509 224 aaKnown RBP15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 YAP1P46937 504 aaKnown RBP15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 NKX6-1P78426 367 aaPredicted RBP15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 VLDLRP98155 873 aa15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 BSPH1Q075Z2 132 aa15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 TMEM225Q6GV28 225 aa15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 P2RY8Q86VZ1 359 aa15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 LRRC75A-AS1Q8N1F1 130 aa15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 AKAP1Q92667 903 aaKnown RBP eCLIP15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 MUCL1Q96DR8 90 aa15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 SLC41A3Q96GZ6 507 aa15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 RSRC1Q96IZ7 334 aaKnown RBP15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 FNDC11Q9BVV2 318 aa15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 DLL4Q9NR61 685 aa15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 NDUFAF4Q9P032 175 aa15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 RIMS3Q9UJD0 308 aa15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 AURKCQ9UQB9 309 aa15.71■□□□□ 0.11
TNFRSF1A-209ENST00000536717 TCRBV3S1A0A5B6 114 aa15.7■□□□□ 0.1
TNFRSF1A-209ENST00000536717 CIB4A0PJX0 185 aa15.7■□□□□ 0.1
TNFRSF1A-209ENST00000536717 SMPD2O60906 423 aa15.7■□□□□ 0.1
TNFRSF1A-209ENST00000536717 VAMP5O95183 116 aa15.7■□□□□ 0.1
TNFRSF1A-209ENST00000536717 CD3EP07766 207 aa15.7■□□□□ 0.1
TNFRSF1A-209ENST00000536717 RAP2AP10114 183 aa15.7■□□□□ 0.1
TNFRSF1A-209ENST00000536717 THRBP10828 461 aa15.7■□□□□ 0.1
TNFRSF1A-209ENST00000536717 RHCEP18577 417 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms