RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 RP9Q8TA86 221 aaKnown RBP10.92□□□□□ -0.66
PRKDC-207ENST00000536483 TAAR8Q969N4 342 aa10.92□□□□□ -0.66
PRKDC-207ENST00000536483 TAMM41Q96BW9 452 aa10.92□□□□□ -0.66
PRKDC-207ENST00000536483 ZNF385AQ96PM9 386 aaKnown RBP10.92□□□□□ -0.66
PRKDC-207ENST00000536483 ZNF426Q9BUY5 554 aa10.92□□□□□ -0.66
PRKDC-207ENST00000536483 TRAF4Q9BUZ4 470 aaPredicted RBP10.92□□□□□ -0.66
PRKDC-207ENST00000536483 GRIP2Q9C0E4 1043 aa10.92□□□□□ -0.66
PRKDC-207ENST00000536483 RASSF4Q9H2L5 321 aa10.92□□□□□ -0.66
PRKDC-207ENST00000536483 SLC7A10Q9NS82 523 aa10.92□□□□□ -0.66
PRKDC-207ENST00000536483 GID8Q9NWU2 228 aa10.92□□□□□ -0.66
PRKDC-207ENST00000536483 CISD1Q9NZ45 108 aaKnown RBP10.92□□□□□ -0.66
PRKDC-207ENST00000536483 B3GAT1Q9P2W7 334 aa10.92□□□□□ -0.66
PRKDC-207ENST00000536483 RCE1Q9Y256 329 aa10.92□□□□□ -0.66
PRKDC-207ENST00000536483 AP3M1Q9Y2T2 418 aa10.92□□□□□ -0.66
PRKDC-207ENST00000536483 CORINQ9Y5Q5 1042 aa10.92□□□□□ -0.66
PRKDC-207ENST00000536483 SLC25A15Q9Y619 301 aa10.92□□□□□ -0.66
PRKDC-207ENST00000536483 MRASO14807 208 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 CCDC22O60826 627 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 DCTN3O75935 186 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 ZNF432O94892 652 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 LYPD3O95274 346 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 PTNP21246 168 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 CDH12P55289 794 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 TGFBR3Q03167 851 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 PPA1Q15181 289 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 NPTX1Q15818 432 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 RABL3Q5HYI8 236 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 REP15Q6BDI9 236 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 PODNL1Q6PEZ8 512 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 CASP12Q6UXS9 341 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 H1FNTQ75WM6 255 aaPredicted RBP10.91□□□□□ -0.66
PRKDC-207ENST00000536483 AAED1Q7RTV5 226 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 ZC3HAV1Q7Z2W4 902 aaKnown RBP10.91□□□□□ -0.66
PRKDC-207ENST00000536483 HIPK1Q86Z02 1210 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 SCAIQ8N9R8 606 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 OR6T1Q8NGN1 323 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 MUCL1Q96DR8 90 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 DNAJA3Q96EY1 480 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 RADILQ96JH8 1075 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 HS6ST2Q96MM7 605 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 OXGR1Q96P68 337 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 EPYCQ99645 322 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 ECSITQ9BQ95 431 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 PRR14Q9BWN1 585 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 LINC00470Q9BZP3 86 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 ALG2Q9H553 416 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 ADPRHL2Q9NX46 363 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 SLC13A4Q9UKG4 626 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 CAPN7Q9Y6W3 813 aa10.91□□□□□ -0.66
PRKDC-207ENST00000536483 LOC100653049A0A140TA62 436 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 SHISA9B4DS77 424 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 RPL36A-HNRNPH2H7BZ11 118 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 AIM2O14862 343 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 CHP2O43745 196 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 SSX4O60224 188 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 DNAJC8O75937 253 aaPredicted RBP10.9□□□□□ -0.66
PRKDC-207ENST00000536483 KRT34O76011 436 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 IGF2P01344 180 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 IFNA2P01563 188 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 BGLAPP02818 100 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 THY1P04216 161 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 PTAFRP25105 342 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 RPS5P46782 204 aaKnown RBP10.9□□□□□ -0.66
PRKDC-207ENST00000536483 FOXG1P55316 489 aaPredicted RBP10.9□□□□□ -0.66
PRKDC-207ENST00000536483 C8orf82Q6P1X6 216 aaPredicted RBP10.9□□□□□ -0.66
PRKDC-207ENST00000536483 ABHD12BQ7Z5M8 362 aaPredicted RBP10.9□□□□□ -0.66
PRKDC-207ENST00000536483 SNX32Q86XE0 403 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 PHC2Q8IXK0 858 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 UBE2J2Q8N2K1 259 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 WDR31Q8NA23 367 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 SMYD1Q8NB12 490 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 OR4D11Q8NGI4 311 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 MAGEE2Q8TD90 523 aaPredicted RBP10.9□□□□□ -0.66
PRKDC-207ENST00000536483 MPP4Q96JB8 637 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 MCHR1Q99705 422 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 SLC19A3Q9BZV2 496 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 POLR2J2Q9GZM3 115 aaKnown RBP10.9□□□□□ -0.66
PRKDC-207ENST00000536483 POLR2J3Q9H1A7 115 aaKnown RBP10.9□□□□□ -0.66
PRKDC-207ENST00000536483 OBP2BQ9NPH6 170 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 NPAP1Q9NZP6 1156 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 SVEP1Q4LDE5 3571 aa10.9□□□□□ -0.66
PRKDC-207ENST00000536483 MS4A18H0YCH9 400 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 GPRIN2O60269 458 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 MT-ATP6P00846 226 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 IGHV3-9P01782 118 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 HOXB1P14653 301 aaPredicted RBP10.89□□□□□ -0.67
PRKDC-207ENST00000536483 CDH11P55287 796 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 NCALDP61601 193 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 MS4A18Q3C1V0 323 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 MMEL1Q495T6 779 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 HACD2Q6Y1H2 254 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 ARPINQ7Z6K5 226 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 GPAT4Q86UL3 456 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 DTX2Q86UW9 622 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 TSPYL5Q86VY4 417 aaPredicted RBP10.89□□□□□ -0.67
PRKDC-207ENST00000536483 FAM169BQ8N8A8 192 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 NANOS1Q8WY41 292 aaKnown RBP10.89□□□□□ -0.67
PRKDC-207ENST00000536483 RHNO1Q9BSD3 238 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 MYLK2Q9H1R3 596 aa10.89□□□□□ -0.67
PRKDC-207ENST00000536483 BARX1Q9HBU1 254 aaPredicted RBP10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms