RNA–Protein interactions for RNA: ENST00000534771.1

COPB1-212, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-212ENST00000534771 DEFB119Q8N690 84 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 KIR3DL3Q8N743 410 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 LRRC75AQ8NAA5 344 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 OR4K5Q8NGD3 323 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 PNPT1Q8TCS8 783 aaKnown RBP-0.05□□□□□ -2.42
COPB1-212ENST00000534771 ACOT11Q8WXI4 607 aaPredicted RBP-0.05□□□□□ -2.42
COPB1-212ENST00000534771 MRPS31Q92665 395 aaKnown RBP-0.05□□□□□ -2.42
COPB1-212ENST00000534771 HPDLQ96IR7 371 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 ITCHQ96J02 903 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 CSPG4P5Q96PW8 444 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 TBL1YQ9BQ87 522 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 ALG12Q9BV10 488 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 FTHL17Q9BXU8 183 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 DUSP16Q9BY84 665 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 EDEM3Q9BZQ6 932 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 UBE2ZQ9H832 354 aaPredicted RBP-0.05□□□□□ -2.42
COPB1-212ENST00000534771 RETNQ9HD89 108 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 ISYNA1Q9NPH2 558 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 TAS2R1Q9NYW7 299 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 CNIH4Q9P003 139 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 P2RX2Q9UBL9 471 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 ATP6V1HQ9UI12 483 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 FBXW2Q9UKT8 454 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 LIPT1Q9Y234 373 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 RNF6Q9Y252 685 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 SPACA6W5XKT8 324 aa-0.05□□□□□ -2.42
COPB1-212ENST00000534771 PIKFYVEQ9Y2I7 2098 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 TET2Q6N021 2002 aaPredicted RBP-0.06□□□□□ -2.42
COPB1-212ENST00000534771 NSG1A0A0A6YYJ2 146 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 A0A0U1RQG5 324 aaPredicted RBP-0.06□□□□□ -2.42
COPB1-212ENST00000534771 A0A0U1RRA0 63 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 CENPVL3A0A0U1RRI6 287 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 A0A1B0GUS0 222 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 CIB4A0PJX0 185 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 VSTM2BA6NLU5 285 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 C12orf77C9JDV5 145 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 MANBAO00462 879 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 KMOO15229 486 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 PLXNB1O43157 2135 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 DUX1O43812 170 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 UGT1A9O60656 530 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 RP2O75695 350 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 TRIM16O95361 564 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 HLA-DQB1P01920 261 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 CBR1P16152 277 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 YWHABP31946 246 aaKnown RBP-0.06□□□□□ -2.42
COPB1-212ENST00000534771 SOX6P35712 828 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 OPRD1P41143 372 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 MAGEA5P43359 124 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 SYKP43405 635 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 DAP3P51398 398 aaKnown RBP-0.06□□□□□ -2.42
COPB1-212ENST00000534771 HNRNPFP52597 415 aaKnown RBP-0.06□□□□□ -2.42
COPB1-212ENST00000534771 NME5P56597 212 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 HSD17B7P56937 341 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 SRP54P61011 504 aaKnown RBP-0.06□□□□□ -2.42
COPB1-212ENST00000534771 FMODQ06828 376 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 SPP2Q13103 211 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 BIKQ13323 160 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 EXOSC2Q13868 293 aaKnown RBP-0.06□□□□□ -2.42
COPB1-212ENST00000534771 FAM53BQ14153 422 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 CHI3L2Q15782 390 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 MICBQ29980 383 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 ZNF181Q2M3W8 571 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 TRIM16LQ309B1 348 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 SAMD4BQ5PRF9 694 aaKnown RBP-0.06□□□□□ -2.42
COPB1-212ENST00000534771 C12orf60Q5U649 245 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 OR2A2Q6IF42 318 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 ACSM5Q6NUN0 579 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 C16orf54Q6UWD8 224 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 DLEU7Q6UYE1 221 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 C16orf47Q6ZP98 133 aaPredicted RBP-0.06□□□□□ -2.42
COPB1-212ENST00000534771 TMPPEQ6ZT21 453 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 ABHD13Q7L211 337 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 TCF24Q7RTU0 167 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 ANKRD37Q7Z713 158 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 TPRA1Q86W33 373 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 CALHM1Q8IU99 346 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 SERPINA12Q8IW75 414 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 SYCP3Q8IZU3 236 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 CCDC89Q8N998 374 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 NOXO1Q8NFA2 376 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 OR4K14Q8NGD5 310 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 OR8U1Q8NH10 309 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 CIRBP-AS1Q8TBR5 109 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 ABHD3Q8WU67 409 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 C15orf40Q8WUR7 153 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 HTR3CQ8WXA8 447 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 GEMIN6Q8WXD5 167 aaKnown RBP-0.06□□□□□ -2.42
COPB1-212ENST00000534771 SHC3Q92529 594 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 FLYWCH2Q96CP2 140 aaKnown RBP-0.06□□□□□ -2.42
COPB1-212ENST00000534771 CMTM7Q96FZ5 175 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 DUS3LQ96G46 650 aaKnown RBP-0.06□□□□□ -2.42
COPB1-212ENST00000534771 RNF145Q96MT1 663 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 IP6K3Q96PC2 410 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 RHOXF2Q9BQY4 288 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 AP1M1Q9BXS5 423 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 CACNG6Q9BXT2 260 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 CAPS2Q9BXY5 557 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 RAB17Q9H0T7 212 aa-0.06□□□□□ -2.42
COPB1-212ENST00000534771 RNF167Q9H6Y7 350 aa-0.06□□□□□ -2.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms