RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 RANBP3LQ86VV4 465 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 WFDC8Q8IUA0 241 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 PACRGLQ8N7B6 248 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 FAM71CQ8NEG0 241 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 OR10H5Q8NGA6 315 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 GIPC3Q8TF64 312 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 DUSP19Q8WTR2 217 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 RNF138Q8WVD3 245 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 SLC41A3Q96GZ6 507 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 DHRS1Q96LJ7 313 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 PRRC1Q96M27 445 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 SFXN2Q96NB2 322 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 TRIM2Q9C040 744 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 SMURF2Q9HAU4 748 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 TMEM27Q9HBJ8 222 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 PDP1Q9P0J1 537 aaPredicted RBP10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 TMCC3Q9ULS5 477 aa10.04□□□□□ -0.8
TRAPPC4-213ENST00000533149 TRBV4-1A0A0J9YWV2 114 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 A0A1W2PRQ8 180 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 TRAPPC13A5PLN9 417 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 C2orf72A6NCS6 295 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 SSX4O60224 188 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 EIF4E2O60573 245 aaKnown RBP10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 LYPD3O95274 346 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 THY1P04216 161 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 LINGO3P0C6S8 592 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 SRD5A2P31213 254 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 GAS1P54826 345 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 ST3GAL3Q11203 375 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 FAPQ12884 760 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 SKP2Q13309 424 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 DAG1Q14118 895 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 DGCR6Q14129 220 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 MICAQ29983 383 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 FGD3Q5JSP0 725 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 FAM120AOSQ5T036 256 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 CLEC2AQ6UVW9 174 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 CBLN3Q6UW01 205 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 OFCC1Q8IZS5 231 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 RFLNBQ8N5W9 214 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 ARIH2OSQ8N7S6 290 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 LILRB1Q8NHL6 650 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 SH3YL1Q96HL8 342 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 FUZQ9BT04 418 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 OSBPL11Q9BXB4 747 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 OSBPL10Q9BXB5 764 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 GRIP2Q9C0E4 1043 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 POLR2J2Q9GZM3 115 aaKnown RBP10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 POLR2J3Q9H1A7 115 aaKnown RBP10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 OR10A4Q9H209 315 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 VCXQ9H320 206 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 RNF122Q9H9V4 155 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 EXOSC3Q9NQT5 275 aaKnown RBP10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 C8orf4Q9NR00 106 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 MAN2C1Q9NTJ4 1040 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 TESQ9UGI8 421 aaKnown RBP10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 GDF2Q9UK05 429 aaPredicted RBP10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 KCNS2Q9ULS6 477 aa10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 MRPS18CQ9Y3D5 142 aaKnown RBP10.03□□□□□ -0.8
TRAPPC4-213ENST00000533149 C7orf72A4D263 438 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 ELOA3DA6NLF2 546 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 C17orf51A8MQB3 221 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 EI24O14681 340 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 TCF21O43680 179 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 NDUFS7O75251 213 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 CCNB2O95067 398 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 CD3EP07766 207 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 SLC25A16P16260 332 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 ZNF16P17020 682 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 EGR1P18146 543 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 PTGDSP41222 190 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 ALDH3A2P51648 485 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 NUDT6P53370 316 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 AQP4P55087 323 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 ZNF117Q03924 483 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 C17orf67Q0P5P2 114 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 GK3PQ14409 553 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 TRAM2Q15035 370 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 SEC23BQ15437 767 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 ELOA3BQ3SY89 546 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 FAM166AQ6J272 317 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 ZNF613Q6PF04 617 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 STAC2Q6ZMT1 411 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 FAM214BQ7L5A3 538 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 MISPQ8IVT2 679 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 NKAIN4Q8IVV8 208 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 TMCO5AQ8N6Q1 288 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 LSMEM1Q8N8F7 131 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 WDSUB1Q8N9V3 476 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 ELOA3Q8NG57 546 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 OR10G2Q8NGC3 310 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 MAGEE2Q8TD90 523 aaPredicted RBP10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 ADAMTS16Q8TE57 1224 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 DNAJC9Q8WXX5 260 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 ACTR6Q9GZN1 396 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 GALNT9Q9HCQ5 603 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 NGBQ9NPG2 151 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 SDHAF3Q9NRP4 125 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 FAIMQ9NVQ4 179 aa10.02□□□□□ -0.81
TRAPPC4-213ENST00000533149 USE1Q9NZ43 259 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms