RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 C8orf82Q6P1X6 216 aaPredicted RBP10.75□□□□□ -0.69
CAPN1-223ENST00000533079 ANKRD16Q6P6B7 361 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 SVOPLQ8N434 492 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 GLB1L3Q8NCI6 653 aaPredicted RBP10.75□□□□□ -0.69
CAPN1-223ENST00000533079 OR5D16Q8NGK9 328 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 HOPXQ9BPY8 73 aaPredicted RBP10.75□□□□□ -0.69
CAPN1-223ENST00000533079 THTPAQ9BU02 230 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 OR11A1Q9GZK7 315 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 DENND2DQ9H6A0 471 aaPredicted RBP10.75□□□□□ -0.69
CAPN1-223ENST00000533079 POLE3Q9NRF9 147 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 KCNE5Q9UJ90 142 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 PTGDR2Q9Y5Y4 395 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 TGP01266 2768 aa10.75□□□□□ -0.69
CAPN1-223ENST00000533079 AIM2O14862 343 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 CIB2O75838 187 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 ATP6V1G2O95670 118 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 AGR2O95994 175 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 SAGP10523 405 aaPredicted RBP10.74□□□□□ -0.69
CAPN1-223ENST00000533079 BCKDHAP12694 445 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 CDH2P19022 906 aaPredicted RBP10.74□□□□□ -0.69
CAPN1-223ENST00000533079 ACHEP22303 614 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 CALCRP30988 508 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 GPR6P46095 362 aaPredicted RBP10.74□□□□□ -0.69
CAPN1-223ENST00000533079 EVX1P49640 407 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 ACTR3P61158 418 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 DEFA6Q01524 100 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 FOXL1Q12952 345 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 SNCBQ16143 134 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 AP1ARQ63HQ0 302 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 AAED1Q7RTV5 226 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 ADGRG3Q86Y34 549 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 DEFB107AQ8IZN7 70 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 FNDC5Q8NAU1 212 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 ANKK1Q8NFD2 765 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 OR9K2Q8NGE7 335 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 CLDND2Q8NHS1 167 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 MRPL24Q96A35 216 aaKnown RBP10.74□□□□□ -0.69
CAPN1-223ENST00000533079 RACGAP1Q9H0H5 632 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 EXD2Q9NVH0 621 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 CCDC167Q9P0B6 97 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 SLC7A8Q9UHI5 535 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 BAIAP2L1Q9UHR4 511 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 TRRAPQ9Y4A5 3859 aa10.74□□□□□ -0.69
CAPN1-223ENST00000533079 CENPVL1A0A0U1RR11 272 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 M0R233 179 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 FBP2O00757 339 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 C6orf47O95873 294 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 GAAP10253 952 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 IMPDH2P12268 514 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 ANPEPP15144 967 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 THBS4P35443 961 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 NUDT2P50583 147 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 POLR2HP52434 150 aaKnown RBP10.73□□□□□ -0.69
CAPN1-223ENST00000533079 MRPS11P82912 194 aaKnown RBP10.73□□□□□ -0.69
CAPN1-223ENST00000533079 MMEL1Q495T6 779 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 OTUD3Q5T2D3 398 aaPredicted RBP10.73□□□□□ -0.69
CAPN1-223ENST00000533079 IL23RQ5VWK5 629 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 C16orf62Q7Z3J2 963 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 C1QL2Q7Z5L3 287 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 DPP10Q8N608 796 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 IL17RDQ8NFM7 739 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 OR7A2PQ8NGA2 310 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 RCN3Q96D15 328 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 AURKBQ96GD4 344 aaPredicted RBP10.73□□□□□ -0.69
CAPN1-223ENST00000533079 PRPF18Q99633 342 aaKnown RBP10.73□□□□□ -0.69
CAPN1-223ENST00000533079 MS4A5Q9H3V2 200 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 DCLRE1BQ9H816 532 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 GID8Q9NWU2 228 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 MKLN1Q9UL63 735 aa10.73□□□□□ -0.69
CAPN1-223ENST00000533079 TMED7-TICAM2A0A0A6YYA0 188 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 TMEM129A0AVI4 362 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 AQP7P3A6NL99 342 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 J3QLI3 93 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 FAAHO00519 579 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 ANGPT2O15123 496 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 SYNGR3O43761 229 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 FCMRO60667 390 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 RGS9O75916 674 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-223ENST00000533079 VAMP5O95183 116 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 LGI1O95970 557 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 GPIP06744 558 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 IGFBP1P08833 259 aaPredicted RBP10.72□□□□□ -0.69
CAPN1-223ENST00000533079 ADRA2AP08913 450 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 LAMP1P11279 417 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 UQCRBP14927 111 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 MATN1P21941 496 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 SOAT1P35610 550 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 ARR3P36575 388 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 POLR2JP52435 117 aaKnown RBP10.72□□□□□ -0.69
CAPN1-223ENST00000533079 CLDN8P56748 225 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 PSME3P61289 254 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 HGFACQ04756 655 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 ATAD3BQ5T9A4 648 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 TREML4Q6UXN2 200 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 CMIPQ8IY22 773 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 CDK20Q8IZL9 346 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 ZCCHC24Q8N2G6 241 aaKnown RBP10.72□□□□□ -0.69
CAPN1-223ENST00000533079 ZIC4Q8N9L1 334 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 OR5AK3PQ8NH89 298 aa10.72□□□□□ -0.69
CAPN1-223ENST00000533079 MIPOL1Q8TD10 442 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms