RNA–Protein interactions for RNA: ENST00000532602.1

PCDHA9-202, Transcript of protocadherin alpha 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA9, Length 6,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-202ENST00000532602 HSD17B8Q92506 261 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 C8orf44Q96CB5 159 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 TEX37Q96LM6 180 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 OR2B2Q9GZK3 357 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 ENPP5Q9UJA9 477 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 WDR37Q9Y2I8 494 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 PLPP1O14494 284 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 AQP2P41181 271 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 TBCEQ15813 527 aaPredicted RBP13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 DUSP7Q16829 419 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 VWA2Q5GFL6 755 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 OR2T35Q8NGX2 323 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 SLC25A31Q9H0C2 315 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 OLAHQ9NV23 265 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 LRFN1Q9P244 771 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 FAM166BA8MTA8 275 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 MT-ATP6P00846 226 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 ZDHHC11BP0C7U3 371 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 IL3RAP26951 378 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 NR4A2P43354 598 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 ALDH3B2P48448 385 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 GOT1L1Q8NHS2 421 aaPredicted RBP13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 APH1AQ96BI3 265 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 BOD1Q96IK1 185 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 MFRPQ9BY79 579 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 PCDHGA1Q9Y5H4 931 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 FER1L6Q2WGJ9 1857 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 A0A1B0GWA3 101 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 ATP6V1G1O75348 118 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 MFSD12Q6NUT3 480 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 ZNF585AQ6P3V2 769 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 SLC35D2Q76EJ3 337 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 TMEM255BQ8WV15 326 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 SGK3Q96BR1 496 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 ZC3HAV1LQ96H79 300 aaKnown RBP13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 EGLN1Q9GZT9 426 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 SLC23A2Q9UGH3 650 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 DUSP13Q9UII6 198 aa13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 KLF13Q9Y2Y9 288 aaPredicted RBP13.65□□□□□ -0.22
PCDHA9-202ENST00000532602 LRIT2A6NDA9 550 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 IGLV3-25P01717 112 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 LGALS4P56470 323 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 TFF2Q03403 129 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 ZNF91Q05481 1191 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 GIMAP5Q96F15 307 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 STACQ99469 402 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 CPNE5Q9HCH3 593 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 DPM1O60762 260 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 NCR1O76036 304 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 SNCAP37840 140 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 COX15Q7KZN9 410 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 DPCDQ9BVM2 203 aaPredicted RBP13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 OR51E2Q9H255 320 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 A4GALTQ9NPC4 353 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 TMEM9BQ9NQ34 198 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 COL4A1P02462 1669 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 A8MXE2 369 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 BDKRB2P30411 391 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 GPR85P60893 370 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 RAB4BP61018 213 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 IKZF1Q13422 519 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 CMPK2Q5EBM0 449 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 DPY19L2P2Q6ZN68 376 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 GRINAQ7Z429 371 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 ZNF687Q8N1G0 1237 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 ARSGQ96EG1 525 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 UBL7Q96S82 380 aaPredicted RBP13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 SIDT1Q9NXL6 827 aaKnown RBP13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 SHROOM3Q8TF72 1996 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 SLC5A10A0PJK1 596 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 TMEM221A6NGB7 291 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 ZNF701M0R085 212 aaPredicted RBP13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 VAMP5O95183 116 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 IFNA17P01571 189 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 ZNF14P17017 642 aaPredicted RBP13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 LUMP51884 338 aaPredicted RBP13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 ZNF136P52737 540 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 LRRC28Q86X40 367 aaPredicted RBP13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 RDH10Q8IZV5 341 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 ZFP90Q8TF47 636 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 SNX18Q96RF0 628 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 TNFRSF13CQ96RJ3 184 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 THAP7Q9BT49 309 aaPredicted RBP13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 WDR76Q9H967 626 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 YARS2Q9Y2Z4 477 aaKnown RBP13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 PTGER4P35408 488 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 B3GNT8Q7Z7M8 397 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 CPEB3Q8NE35 698 aaKnown RBP13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 CHTF18Q8WVB6 975 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 TFAP2CQ92754 450 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 TMEM165Q9HC07 324 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 GLTPQ9NZD2 209 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 RASD1Q9Y272 281 aa13.64□□□□□ -0.23
PCDHA9-202ENST00000532602 IL13RA1P78552 427 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 LTBQ06643 244 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 AGBL4Q5VU57 503 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 ZNF836Q6ZNA1 936 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 ABHD11Q8NFV4 315 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 KCNG3Q8TAE7 436 aa13.63□□□□□ -0.23
PCDHA9-202ENST00000532602 ELP4Q96EB1 424 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms