RNA–Protein interactions for RNA: ENST00000532538.1

BRPF3-210, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 4

Gene BRPF3, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-210ENST00000532538 PDCD4Q53EL6 469 aaKnown RBP13.17□□□□□ -0.3
BRPF3-210ENST00000532538 RINLQ6ZS11 566 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 LINC01356Q8N9X3 169 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 PIK3C3Q8NEB9 887 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 SLC38A4Q969I6 547 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 KTI12Q96EK9 354 aaPredicted RBP13.17□□□□□ -0.3
BRPF3-210ENST00000532538 BOD1Q96IK1 185 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 TPK1Q9H3S4 243 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 RAD21L1Q9H4I0 556 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 OCEL1Q9H607 264 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 ZNF442Q9H7R0 627 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 B3GAT2Q9NPZ5 323 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 THAP1Q9NVV9 213 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 CMAHPQ9Y471 501 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 SPEF1Q9Y4P9 236 aa13.17□□□□□ -0.3
BRPF3-210ENST00000532538 DSPPQ9NZW4 1301 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 TMEM229AB2RXF0 380 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 SLCO1B7G3V0H7 640 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 M0R082 166 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 IGKV3-15P01624 115 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 IGLV1-44P01699 117 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 POLR2JP52435 117 aaKnown RBP13.16□□□□□ -0.3
BRPF3-210ENST00000532538 HGFACQ04756 655 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 GKAP1Q5VSY0 366 aaPredicted RBP13.16□□□□□ -0.3
BRPF3-210ENST00000532538 WDR93Q6P2C0 686 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 MDP1Q86V88 176 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 UEVLDQ8IX04 471 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 C10orf53Q8N6V4 93 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 IL17RDQ8NFM7 739 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 ZNF417Q8TAU3 575 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 ZNF587Q96SQ5 575 aaPredicted RBP13.16□□□□□ -0.3
BRPF3-210ENST00000532538 SOX7Q9BT81 388 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 SEC14L4Q9UDX3 406 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 SLC13A4Q9UKG4 626 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 RCE1Q9Y256 329 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 POFUT2Q9Y2G5 429 aa13.16□□□□□ -0.3
BRPF3-210ENST00000532538 IGHV2OR16-5A0A0B4J2B6 119 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 ZNF99A8MXY4 864 aaPredicted RBP13.15□□□□□ -0.3
BRPF3-210ENST00000532538 UBDO15205 165 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 SERPINI2O75830 405 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 ZCCHC18P0CG32 403 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 PCMT1P22061 227 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 GRPRP30550 384 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 IL2RGP31785 369 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 GALK2Q01415 458 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 PIGFQ07326 219 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 MPP2Q14168 576 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 TRMT5Q32P41 509 aaKnown RBP13.15□□□□□ -0.3
BRPF3-210ENST00000532538 ALG10BQ5I7T1 473 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 FAM69AQ5T7M9 428 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 UGT2A3Q6UWM9 527 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 H1FNTQ75WM6 255 aaPredicted RBP13.15□□□□□ -0.3
BRPF3-210ENST00000532538 CROCCP2Q86T23 111 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 MYPOPQ86VE0 399 aaPredicted RBP13.15□□□□□ -0.3
BRPF3-210ENST00000532538 CCDC36Q8IYA8 594 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 CDK20Q8IZL9 346 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 MREGQ8N565 214 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 RFLNBQ8N5W9 214 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 FAM169BQ8N8A8 192 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 BBS10Q8TAM1 723 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 MAL2Q969L2 176 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 VPS33AQ96AX1 596 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 DOK1Q99704 481 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 ASPNQ9BXN1 380 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 NELFAQ9H3P2 528 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 NARFLQ9H6Q4 476 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 ZIM2Q9NZV7 527 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 METRNQ9UJH8 293 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 STAB1Q9NY15 2570 aa13.15□□□□□ -0.3
BRPF3-210ENST00000532538 ZNF726A6NNF4 738 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 FTCDNL1E5RQL4 147 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 LYNX1G3V0Z9 82 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 RPL36A-HNRNPH2H7BZ11 118 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 CLIC1O00299 241 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 NPIPB7O75200 414 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 NUDT7P0C024 238 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 LYNX1P0DP58 116 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 LSP1P33241 339 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 MVDP53602 400 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 STX1BP61266 288 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 EGR4Q05215 589 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 TRIP10Q15642 601 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 GSG1Q2KHT4 349 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 C5orf46Q6UWT4 87 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 ZNF813Q6ZN06 617 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 KRT73Q86Y46 540 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 MIER2Q8N344 545 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 ZNF786Q8N393 782 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 ANKK1Q8NFD2 765 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 OR9I1Q8NGQ6 314 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 OR6N1Q8NGY5 312 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 HPS1Q92902 700 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 TAAR8Q969N4 342 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 ZNF837Q96EG3 531 aaPredicted RBP13.14□□□□□ -0.31
BRPF3-210ENST00000532538 EMC6Q9BV81 110 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 PTDSS2Q9BVG9 487 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 NOX3Q9HBY0 568 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 NKIRAS1Q9NYS0 192 aa13.14□□□□□ -0.31
BRPF3-210ENST00000532538 TRAV36DV7A0A075B6V5 113 aa13.13□□□□□ -0.31
BRPF3-210ENST00000532538 TMEM120BA0PK00 339 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms