RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ZNF701M0R085 212 aaPredicted RBP10.41□□□□□ -0.74
PTPRK-221ENST00000532331 FGF17O60258 216 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 DRD5P21918 477 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 HTR2AP28223 471 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 PTGS2P35354 604 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 ATP1B3P54709 279 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 VASH2Q86V25 355 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 SGPP2Q8IWX5 399 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 SPIN2AQ99865 258 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 SPIN2BQ9BPZ2 258 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 SGPP1Q9BX95 441 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 MED17Q9NVC6 651 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 TRBV5-4A0A0C4DH59 114 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 ZNF736B4DX44 427 aaPredicted RBP10.41□□□□□ -0.74
PTPRK-221ENST00000532331 KIR2DL3P43628 341 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 SPRED3Q2MJR0 410 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 TRMT12Q53H54 448 aaKnown RBP10.41□□□□□ -0.74
PTPRK-221ENST00000532331 B3GNT8Q7Z7M8 397 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 ZNF695Q8IW36 515 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 PRR18Q8N4B5 295 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 ASCC1Q8N9N2 400 aaKnown RBP10.41□□□□□ -0.74
PTPRK-221ENST00000532331 ZFP90Q8TF47 636 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 EGLN1Q9GZT9 426 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 PRDM6Q9NQX0 595 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 ATP23Q9Y6H3 246 aa10.41□□□□□ -0.74
PTPRK-221ENST00000532331 TRBV4-1A0A0J9YWV2 114 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 METTL15A6NJ78 407 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 PATE3B3GLJ2 98 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 UCNP55089 124 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 P2RY14Q15391 338 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 OR1C1Q15619 314 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 WFDC8Q8IUA0 241 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 TMIGD2Q96BF3 282 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 NEURL3Q96EH8 262 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 EGLN3Q9H6Z9 239 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 ZNF71Q9NQZ8 489 aaPredicted RBP10.4□□□□□ -0.74
PTPRK-221ENST00000532331 HMX3A6NHT5 357 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 LRRC30A6NM36 301 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 TRAPPC2LH3BP13 241 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 LCMT2O60294 686 aaKnown RBP10.4□□□□□ -0.74
PTPRK-221ENST00000532331 TP53P04637 393 aaPredicted RBP10.4□□□□□ -0.74
PTPRK-221ENST00000532331 DBHP09172 617 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 AKAIN1P0CW23 69 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 PPICP45877 212 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 RTL6Q6ICC9 239 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 MRPL41Q8IXM3 137 aaKnown RBP10.4□□□□□ -0.74
PTPRK-221ENST00000532331 LILRA2Q8N149 483 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 GLYATL2Q8WU03 294 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 NRG4Q8WWG1 115 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 OR2B2Q9GZK3 357 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 C19orf53Q9UNZ5 99 aaPredicted RBP10.4□□□□□ -0.74
PTPRK-221ENST00000532331 PCP4L1A6NKN8 68 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 DVL2O14641 736 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 GOSR2O14653 212 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 SC5DO75845 299 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 MLLT11Q13015 90 aaPredicted RBP10.4□□□□□ -0.74
PTPRK-221ENST00000532331 RBM39Q14498 530 aaKnown RBP10.4□□□□□ -0.74
PTPRK-221ENST00000532331 SSPNQ14714 243 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 ZNF766Q5HY98 468 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 FAM199XQ6PEV8 388 aaPredicted RBP10.4□□□□□ -0.74
PTPRK-221ENST00000532331 FAM57BQ71RH2 274 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 LIMS2Q7Z4I7 341 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 SLC16A11Q8NCK7 471 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 CPEB3Q8NE35 698 aaKnown RBP10.4□□□□□ -0.74
PTPRK-221ENST00000532331 ADAMTS14Q8WXS8 1223 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 CNOT9Q92600 299 aaKnown RBP10.4□□□□□ -0.74
PTPRK-221ENST00000532331 EIF5A2Q9GZV4 153 aaKnown RBP10.4□□□□□ -0.74
PTPRK-221ENST00000532331 FKRPQ9H9S5 495 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 A4GALTQ9NPC4 353 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 QSER1Q2KHR3 1735 aa10.4□□□□□ -0.74
PTPRK-221ENST00000532331 hCG_1809904A0A1W2PP81 198 aa10.4□□□□□ -0.75
PTPRK-221ENST00000532331 A0A1W2PPE2 198 aa10.4□□□□□ -0.75
PTPRK-221ENST00000532331 A0A1W2PR48 441 aa10.4□□□□□ -0.75
PTPRK-221ENST00000532331 A0A1W2PR64 198 aa10.4□□□□□ -0.75
PTPRK-221ENST00000532331 A0A1W2PRV1 198 aa10.4□□□□□ -0.75
PTPRK-221ENST00000532331 ZNF44P15621 663 aa10.4□□□□□ -0.75
PTPRK-221ENST00000532331 GABRR1P24046 479 aa10.4□□□□□ -0.75
PTPRK-221ENST00000532331 RFC3P40938 356 aa10.4□□□□□ -0.75
PTPRK-221ENST00000532331 C1orf140Q5VVS0 124 aa10.4□□□□□ -0.75
PTPRK-221ENST00000532331 OR7E24Q6IFN5 339 aa10.4□□□□□ -0.75
PTPRK-221ENST00000532331 MBOAT2Q6ZWT7 520 aa10.4□□□□□ -0.75
PTPRK-221ENST00000532331 RETREG3Q86VR2 466 aa10.4□□□□□ -0.75
PTPRK-221ENST00000532331 GGHQ92820 318 aa10.4□□□□□ -0.75
PTPRK-221ENST00000532331 MOKQ9UQ07 419 aa10.4□□□□□ -0.75
PTPRK-221ENST00000532331 EPOPA6NHQ4 379 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 GASTP01350 101 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 SFTPCP11686 197 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 ARNTP27540 789 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 PRKAR1BP31321 381 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 METTL11BQ5VVY1 283 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 CYP4V2Q6ZWL3 525 aaPredicted RBP10.39□□□□□ -0.75
PTPRK-221ENST00000532331 ZNF583Q96ND8 569 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 DUSP22Q9NRW4 184 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 CACNG2Q9Y698 323 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 A0A1B0GWA3 101 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 SERPINE2P07093 398 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 DRD3P35462 400 aa10.39□□□□□ -0.75
PTPRK-221ENST00000532331 EMX1Q04741 257 aaPredicted RBP10.39□□□□□ -0.75
PTPRK-221ENST00000532331 TBCEQ15813 527 aaPredicted RBP10.39□□□□□ -0.75
PTPRK-221ENST00000532331 FAM69AQ5T7M9 428 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms