RNA–Protein interactions for RNA: ENST00000532078.1

DEPDC7-204, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-204ENST00000532078 GGTLC2Q14390 218 aa13.22□□□□□ -0.29
DEPDC7-204ENST00000532078 RGNQ15493 299 aa13.22□□□□□ -0.29
DEPDC7-204ENST00000532078 C5orf46Q6UWT4 87 aa13.22□□□□□ -0.29
DEPDC7-204ENST00000532078 C6orf89Q6UWU4 347 aa13.22□□□□□ -0.29
DEPDC7-204ENST00000532078 LINGO2Q7L985 606 aa13.22□□□□□ -0.29
DEPDC7-204ENST00000532078 MAVSQ7Z434 540 aa13.22□□□□□ -0.29
DEPDC7-204ENST00000532078 FAM169BQ8N8A8 192 aa13.22□□□□□ -0.29
DEPDC7-204ENST00000532078 OR4F15Q8NGB8 312 aa13.22□□□□□ -0.29
DEPDC7-204ENST00000532078 OR52B2Q96RD2 323 aa13.22□□□□□ -0.29
DEPDC7-204ENST00000532078 PTDSS2Q9BVG9 487 aa13.22□□□□□ -0.29
DEPDC7-204ENST00000532078 SHARPINQ9H0F6 387 aa13.22□□□□□ -0.29
DEPDC7-204ENST00000532078 FBXO9Q9UK97 447 aaPredicted RBP13.22□□□□□ -0.29
DEPDC7-204ENST00000532078 A0A096LPE4 126 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 A0A1W2PPZ6 126 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 VWC2LB2RUY7 222 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 CLIC1O00299 241 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 AIM2O14862 343 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 AKAP8O43823 692 aaKnown RBP13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 FZD7O75084 574 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 SLC43A1O75387 559 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 IGLV1-44P01699 117 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 CECR9P0C854 216 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 NR4A2P43354 598 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 CLDN17P56750 224 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 STX1BP61266 288 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 TUBA1BP68363 451 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 TUBA4AP68366 448 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 HOXC5Q00444 222 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 EFNB3Q15768 340 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 ADIPOQQ15848 244 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 CARTPTQ16568 116 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 FAM166AQ6J272 317 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 TUBA1AQ71U36 451 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 GTF2H4Q92759 462 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 VRK1Q99986 396 aaPredicted RBP13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 PAIP1Q9H074 479 aaKnown RBP13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 NELFAQ9H3P2 528 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 C12orf10Q9HB07 376 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 PCDHB14Q9Y5E9 798 aa13.21□□□□□ -0.29
DEPDC7-204ENST00000532078 LOC390937A0A1W2PQ73 354 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 RPL36A-HNRNPH2H7BZ11 118 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 NR5A2O00482 541 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 OR2T1O43869 369 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 LMX1BO60663 402 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 IGKV3-15P01624 115 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 OR4A8P0C604 315 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 APEHP13798 732 aaKnown RBP13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 ETS2P15036 469 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 PRKAR1BP31321 381 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 PPOXP50336 477 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 MAGOHP61326 146 aaKnown RBP13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 EGR4Q05215 589 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 C1DQ13901 141 aaKnown RBP13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 FAM69AQ5T7M9 428 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 SLC2A7Q6PXP3 512 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 VHLLQ6RSH7 139 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 KDM8Q8N371 416 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 GPR137CQ8N3F9 429 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 ANKS4BQ8N8V4 417 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 NUP37Q8NFH4 326 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 SLC38A4Q969I6 547 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 MAL2Q969L2 176 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 KTI12Q96EK9 354 aaPredicted RBP13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 OXGR1Q96P68 337 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 PLK3Q9H4B4 646 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 KCNS2Q9ULS6 477 aa13.2□□□□□ -0.3
DEPDC7-204ENST00000532078 M0R082 166 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 ZNF432O94892 652 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 ERCC1P07992 297 aaPredicted RBP13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 HOXB9P17482 250 aaPredicted RBP13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 HNF1AP20823 631 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 ARF1P84077 181 aaKnown RBP13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 IL1RL1Q01638 556 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 KRT73Q86Y46 540 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 LSMEM1Q8N8F7 131 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 ZNF540Q8NDQ6 660 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 ADPRHL1Q8NDY3 354 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 PIK3C3Q8NEB9 887 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 ZNF417Q8TAU3 575 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 DNAJA4Q8WW22 397 aaPredicted RBP13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 ZNF587Q96SQ5 575 aaPredicted RBP13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 SPATA5L1Q9BVQ7 753 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 RAB1BQ9H0U4 201 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 ZNF442Q9H7R0 627 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 GPR35Q9HC97 309 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 BRD7Q9NPI1 651 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 B3GAT1Q9P2W7 334 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 SEC14L4Q9UDX3 406 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 USH1CQ9Y6N9 552 aa13.19□□□□□ -0.3
DEPDC7-204ENST00000532078 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.18□□□□□ -0.39e-10■■■■■ 36.7
DEPDC7-204ENST00000532078 TRAV36DV7A0A075B6V5 113 aa13.18□□□□□ -0.3
DEPDC7-204ENST00000532078 LOC100289279A0A1B0GTE1 492 aa13.18□□□□□ -0.3
DEPDC7-204ENST00000532078 A0A1B0GWA3 101 aa13.18□□□□□ -0.3
DEPDC7-204ENST00000532078 VSTM5A8MXK1 200 aa13.18□□□□□ -0.3
DEPDC7-204ENST00000532078 POLR3GO15318 223 aaPredicted RBP13.18□□□□□ -0.3
DEPDC7-204ENST00000532078 CBR1P16152 277 aa13.18□□□□□ -0.3
DEPDC7-204ENST00000532078 SRD5A1P18405 259 aa13.18□□□□□ -0.3
DEPDC7-204ENST00000532078 PPIBP23284 216 aaKnown RBP13.18□□□□□ -0.3
DEPDC7-204ENST00000532078 IGFBP5P24593 272 aa13.18□□□□□ -0.3
DEPDC7-204ENST00000532078 GRPRP30550 384 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms