RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 ORC2Q13416 577 aaPredicted RBP3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 IL18R1Q13478 541 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 KCNJ11Q14654 390 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 MTF1Q14872 753 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 RPEL1Q2QD12 228 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 SAMD4BQ5PRF9 694 aaKnown RBP3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 SEL1L2Q5TEA6 688 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 TIGD3Q6B0B8 471 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 CTRB2Q6GPI1 263 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 PTAR1Q7Z6K3 402 aaPredicted RBP3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 TMEM135Q86UB9 458 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 ZNF575Q86XF7 245 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 CSNK1A1LQ8N752 337 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 ZNF565Q8N9K5 539 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 OR2T33Q8NG76 320 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 OR52B6Q8NGF0 335 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 OR56A4Q8NGH8 313 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 OR1S2Q8NGQ3 325 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 FLVCR1-AS1Q8TAF5 88 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 LGALS14Q8TCE9 139 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 TCP10LQ8TDR4 215 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 TFB1MQ8WVM0 346 aaKnown RBP3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 CAPSLQ8WWF8 208 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 CRYGNQ8WXF5 182 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 GTF2H4Q92759 462 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 SMARCD2Q92925 531 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 ISOC2Q96AB3 205 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 NABP1Q96AH0 204 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 MCHR1Q99705 422 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 MED10Q9BTT4 135 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 SPZ1Q9BXG8 430 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 ULBP2Q9BZM5 246 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 OPN3Q9H1Y3 402 aaPredicted RBP3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 TUBB1Q9H4B7 451 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 MRPL47Q9HD33 250 aaKnown RBP3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 HRASLS2Q9NWW9 162 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 THUMPD1Q9NXG2 353 aaKnown RBP3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 STMN3Q9NZ72 180 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 LGALS13Q9UHV8 139 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 FBXO7Q9Y3I1 522 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 TNFRSF18Q9Y5U5 241 aa3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 PUS1Q9Y606 427 aaKnown RBP eCLIP3.56□□□□□ -1.84
AC055878.1-201ENST00000531858 COL22A1Q8NFW1 1626 aaPredicted RBP3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 JCADQ9P266 1359 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 A0A1B0GWB2 263 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 MYMKA6NI61 221 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 LOC110117498-PIK3R3F6TDL0 507 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 GFYI3L273 518 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 PRMT5O14744 637 aaPredicted RBP3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 SLC19A2O60779 497 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 EEDO75530 441 aaKnown RBP3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 PPP1R3DO95685 299 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 CD160O95971 181 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 IGHV2-5P01817 119 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 OCMP0CE72 109 aaPredicted RBP3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 GFAPP14136 432 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 TBPP20226 339 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 PDHA2P29803 388 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 S100A5P33763 92 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 SPRP35270 261 aaPredicted RBP3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 CLDN6P56747 220 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 RIPK4P57078 832 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 SKP1P63208 163 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 ILF3Q12906 894 aaKnown RBP eCLIP3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 SERTAD2Q14140 314 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 TRAM2Q15035 370 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 ARL6IP1Q15041 203 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 FAM189A2Q15884 450 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 UTF1Q5T230 341 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 C9orf57Q5W0N0 161 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 FAM219BQ5XKK7 198 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 RFWD3Q6PCD5 774 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 TMIGD1Q6UXZ0 262 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 ZNF836Q6ZNA1 936 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 C9orf139Q6ZV77 190 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 BHLHA9Q7RTU4 235 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 PLCZ1Q86YW0 608 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 PDIK1LQ8N165 341 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 NECAP1Q8NC96 275 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 NUP37Q8NFH4 326 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 OR10H4Q8NGA5 316 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 OR5K2Q8NHB8 316 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 MOCOSQ96EN8 888 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 RNF170Q96K19 258 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 HSFY1Q96LI6 401 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 OR8B4Q96RC9 309 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 CYP2S1Q96SQ9 504 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 SORT1Q99523 831 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 HCAR1Q9BXC0 346 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 C1QTNF4Q9BXJ3 329 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 TMEM59Q9BXS4 323 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 PATZ1Q9HBE1 687 aaKnown RBP3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 LY9Q9HBG7 655 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 SDHAF3Q9NRP4 125 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 MS4A12Q9NXJ0 267 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 LSM7Q9UK45 103 aaKnown RBP3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 PPIL1Q9Y3C6 166 aa3.55□□□□□ -1.84
AC055878.1-201ENST00000531858 LRPPRCP42704 1394 aaKnown RBP3.54□□□□□ -1.84
AC055878.1-201ENST00000531858 C1orf232A0A0U1RR37 186 aa3.54□□□□□ -1.84
AC055878.1-201ENST00000531858 FAM172BPA6NC97 362 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms