RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 TNRC6BQ9UPQ9 1833 aaKnown RBP5.05□□□□□ -1.6
PCF11-205ENST00000530906 LAMA2P24043 3122 aaKnown RBP5.05□□□□□ -1.6
PCF11-205ENST00000530906 CACNA1EQ15878 2313 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 IGKV1D-42A0A075B6H8 117 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 FABP12A6NFH5 140 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 FAM183AA6NL82 134 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 CENPBD1B2RD01 187 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 ZNF879B4DU55 563 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 MCIDASD6RGH6 385 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 WWP2O00308 870 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 PDCD5O14737 125 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 MAGEB3O15480 346 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 LRRTM2O43300 516 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 SDC3O75056 442 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 TMCC2O75069 709 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 REM1O75628 298 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 SLC25A12O75746 678 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 APOL3O95236 402 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 NTN1O95631 604 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 RENP00797 406 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 CD63P08962 238 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 GIMD1P0DJR0 217 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 GP1BBP13224 206 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 IL7P13232 177 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 IL9P15248 144 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 FOLR1P15328 257 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 FOSL2P15408 326 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 HIST1H1CP16403 213 aaKnown RBP5.05□□□□□ -1.6
PCF11-205ENST00000530906 SPI1P17947 270 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 BCKDHBP21953 392 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 CXCR1P25024 350 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 FKBP2P26885 142 aaKnown RBP5.05□□□□□ -1.6
PCF11-205ENST00000530906 MAPK3P27361 379 aaPredicted RBP5.05□□□□□ -1.6
PCF11-205ENST00000530906 NR4A2P43354 598 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 EVX1P49640 407 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 P2RX1P51575 399 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 POLR2HP52434 150 aaKnown RBP5.05□□□□□ -1.6
PCF11-205ENST00000530906 SLC16A1P53985 500 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 SCAND1P57086 179 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 ERV3-1Q14264 604 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 IL11RAQ14626 422 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 KCNAB1Q14722 419 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 CDK5R1Q15078 307 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 CD226Q15762 336 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 SGCBQ16585 318 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 ALG10Q5BKT4 473 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 FAM69AQ5T7M9 428 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 PMS2CLQ68D20 193 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 VASNQ6EMK4 673 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 FAAH2Q6GMR7 532 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 ZNF544Q6NX49 715 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 MZT2BQ6NZ67 158 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 FAM131AQ6UXB0 335 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 SLC16A9Q7RTY1 509 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 OVCH1Q7RTY7 1134 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 FAM122BQ7Z309 247 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 GRINAQ7Z429 371 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 FAM220AQ7Z4H9 259 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 MEX3DQ86XN8 651 aaKnown RBP5.05□□□□□ -1.6
PCF11-205ENST00000530906 LAX1Q8IWV1 398 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 C9orf40Q8IXQ3 194 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 SLC35F2Q8IXU6 374 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 OR8H2Q8N162 312 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 TMEM99Q8N816 258 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 SYT14Q8NB59 555 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 NPEPL1Q8NDH3 523 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 ZNF563Q8TA94 476 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 CEP76Q8TAP6 659 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 METTL21AQ8WXB1 218 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 ASB17Q8WXJ9 295 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 TMEM203Q969S6 136 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 NACC2Q96BF6 587 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 EFHD2Q96C19 240 aaPredicted RBP5.05□□□□□ -1.6
PCF11-205ENST00000530906 ZC3HAV1LQ96H79 300 aaKnown RBP5.05□□□□□ -1.6
PCF11-205ENST00000530906 FRMD6Q96NE9 622 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 DDOQ99489 341 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 SDHCQ99643 169 aaPredicted RBP5.05□□□□□ -1.6
PCF11-205ENST00000530906 TIMP4Q99727 224 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 TM9SF2Q99805 663 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 KCNS3Q9BQ31 491 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 SOSTQ9BQB4 213 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 TMED9Q9BVK6 235 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 NUDT9Q9BW91 350 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 SLC7A5P2Q9GIP4 190 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 OR51V1Q9H2C8 321 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 TPK1Q9H3S4 243 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 ZCCHC4Q9H5U6 513 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 WDR54Q9H977 334 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 MARCH7Q9H992 704 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 ABCB9Q9NP78 766 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 PRMT8Q9NR22 394 aaPredicted RBP5.05□□□□□ -1.6
PCF11-205ENST00000530906 QPCTLQ9NXS2 382 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 ABRACLQ9P1F3 81 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 TEKT2Q9UIF3 430 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 RARRES3Q9UL19 164 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 IER3IP1Q9Y5U9 82 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 SCN2AQ99250 2005 aa5.05□□□□□ -1.6
PCF11-205ENST00000530906 IGLV3-32A0A0A0MS00 114 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 A6NIZ1 184 aa5.04□□□□□ -1.6
PCF11-205ENST00000530906 NOTOA8MTQ0 251 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms