RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 ADAP2Q9NPF8 381 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 PNPLA3Q9NST1 481 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 DEPPQ9NTK1 212 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 B3GAT1Q9P2W7 334 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 KCNN3Q9UGI6 736 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 PPP2R2CQ9Y2T4 447 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 OARD1Q9Y530 152 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 MMP24Q9Y5R2 645 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 CLCA3PQ9Y6N3 262 aa5.86□□□□□ -1.47
CSDE1-213ENST00000530784 NCOA6Q14686 2063 aaPredicted RBP5.86□□□□□ -1.47
CSDE1-213ENST00000530784 CELSR1Q9NYQ6 3014 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 A0A0G2JMM0 328 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 A0A1W2PPB8 328 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 A0A1W2PRS3 328 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 PINLYPA6NC86 204 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 LRIT2A6NDA9 550 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 ANKDD1BA6NHY2 528 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 KIR3DP1A8MWS1 328 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 G3V3Y1 287 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 WWP2O00308 870 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 ADAM20O43506 726 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 DIAPH2O60879 1101 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 IFNA16P05015 189 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 GPIP06744 558 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 C1GALT1C1LP0DN25 315 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 CA6P23280 308 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 ELK3P41970 407 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 SLC6A12P48065 614 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 HNRNPFP52597 415 aaKnown RBP5.85□□□□□ -1.47
CSDE1-213ENST00000530784 PLA2G16P53816 162 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 MTTPP55157 894 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 TGM3Q08188 693 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 STX4Q12846 297 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 EFTUD2Q15029 972 aaKnown RBP eCLIP5.85□□□□□ -1.47
CSDE1-213ENST00000530784 TSNQ15631 228 aaKnown RBP5.85□□□□□ -1.47
CSDE1-213ENST00000530784 KRTAP21-3Q3LHN1 58 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 KLHL26Q53HC5 615 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 XKR6Q5GH73 641 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 C16orf47Q6ZP98 133 aaPredicted RBP5.85□□□□□ -1.47
CSDE1-213ENST00000530784 RTL4Q6ZR62 310 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 FAM47EQ6ZV65 393 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 KRT74Q7RTS7 529 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 ADAMTSL2Q86TH1 951 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 LRRC8AQ8IWT6 810 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 ZNF595Q8IYB9 648 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 KLHDC8AQ8IYD2 350 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 MORN4Q8NDC4 146 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 OR2L5Q8NG80 312 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 OR5M9Q8NGP3 310 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 OR10Q1Q8NGQ4 319 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 ACTRT1Q8TDG2 376 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 ANKRD7Q92527 254 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 MS4A6EQ96DS6 147 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 VPS39Q96JC1 886 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 SERINC2Q96SA4 455 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 ABHD1Q96SE0 405 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 FAM173AQ9BQD7 235 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 TTYH2Q9BSA4 534 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 CCDC106Q9BWC9 280 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 CAPS2Q9BXY5 557 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 OR8D2Q9GZM6 311 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 LIN28AQ9H9Z2 209 aaKnown RBP5.85□□□□□ -1.47
CSDE1-213ENST00000530784 IL1RL2Q9HB29 575 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 NKIRAS2Q9NYR9 191 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 COPS7AQ9UBW8 275 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 CHMP2BQ9UQN3 213 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 LIPGQ9Y5X9 500 aa5.85□□□□□ -1.47
CSDE1-213ENST00000530784 DIDO1Q9BTC0 2240 aaKnown RBP5.84□□□□□ -1.47
CSDE1-213ENST00000530784 DCHS2Q6V1P9 2916 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 NCF1BA6NI72 391 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-213ENST00000530784 NCF1CA8MVU1 366 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-213ENST00000530784 C17orf105B2RV13 164 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 CTNSO60931 367 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 CRLF1O75462 422 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 GLSO94925 669 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-213ENST00000530784 IGHG3P01860 377 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 P04436 131 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 OR2T7P0C7T2 308 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 NCF1P14598 390 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-213ENST00000530784 TNNI3P19429 210 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 CNR1P21554 472 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 MAGEA5P43359 124 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 ZFP36L2P47974 494 aaKnown RBP5.84□□□□□ -1.47
CSDE1-213ENST00000530784 DNASE1L1P49184 302 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 LIM2P55344 173 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 FOLH1Q04609 750 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 SERTAD2Q14140 314 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 MORF4L2Q15014 288 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 TGFBIQ15582 683 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 C18orf21Q32NC0 220 aaPredicted RBP5.84□□□□□ -1.47
CSDE1-213ENST00000530784 ADPRMQ3LIE5 342 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 C1orf185Q5T7R7 199 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 WLSQ5T9L3 541 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 STEAP4Q687X5 459 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 OPN5Q6U736 354 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 C16orf54Q6UWD8 224 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 TCAIMQ8N3R3 496 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 TMEM251Q8N6I4 163 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 ZNF614Q8N883 585 aa5.84□□□□□ -1.47
CSDE1-213ENST00000530784 CHDHQ8NE62 594 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms