RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 OR13C2Q8NGS9 318 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 OR6K3Q8NGY3 331 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 PYDC1Q8WXC3 89 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 OXGR1Q96P68 337 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 TACO1Q9BSH4 297 aaKnown RBP12.44□□□□□ -0.42
USF1-209ENST00000529476 TAS2R5Q9NYW4 299 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 EMC3Q9P0I2 261 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 DNAJB9Q9UBS3 223 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 TMEM5Q9Y2B1 443 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 FLVCR1Q9Y5Y0 555 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 CACNA1CQ13936 2221 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 CSMD1Q96PZ7 3565 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 NKX2-6A6NCS4 301 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 EEF1E1-BLOC1S5C9J1V9 151 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 BLOC1S5-TXNDC5H3BN57 136 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 CDC42EP2O14613 210 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 GPR171O14626 319 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 CLOCKO15516 846 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 EEF1E1O43324 174 aaKnown RBP12.43□□□□□ -0.42
USF1-209ENST00000529476 ENTPD5O75356 428 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 SMNDC1O75940 238 aaKnown RBP eCLIP12.43□□□□□ -0.42
USF1-209ENST00000529476 CCNB2O95067 398 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 OR6A2O95222 327 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 CLDN14O95500 239 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 CGAP01215 116 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 HLA-DOBP13765 273 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 AHCYP23526 432 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 EDNRAP25101 427 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 PUDPQ08623 228 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 C1DQ13901 141 aaKnown RBP12.43□□□□□ -0.42
USF1-209ENST00000529476 POU4F3Q15319 338 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 EEF1A1P5Q5VTE0 462 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 CREB3L2Q70SY1 520 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.43□□□□□ -0.42
USF1-209ENST00000529476 ZER1Q7Z7L7 766 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 GALNT5Q7Z7M9 940 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 TMEM179BQ7Z7N9 219 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 EPHX4Q8IUS5 362 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 OR9Q2Q8NGE9 314 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 OR51A7Q8NH64 312 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 MOSPD2Q8NHP6 518 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 ZNF385AQ96PM9 386 aaKnown RBP12.43□□□□□ -0.42
USF1-209ENST00000529476 GPA33Q99795 319 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 OPN3Q9H1Y3 402 aaPredicted RBP12.43□□□□□ -0.42
USF1-209ENST00000529476 NTN4Q9HB63 628 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 KRCC1Q9NPI7 259 aaPredicted RBP12.43□□□□□ -0.42
USF1-209ENST00000529476 PROCRQ9UNN8 238 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 NOSIPQ9Y314 301 aaKnown RBP12.43□□□□□ -0.42
USF1-209ENST00000529476 FREM1Q5H8C1 2179 aa12.43□□□□□ -0.42
USF1-209ENST00000529476 POLQO75417 2590 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 TRAV27A0A087WT01 109 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 LOC102725191A0A1B0GVB3 256 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 H3BNX3 289 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 HNRNPRO43390 633 aaKnown RBP12.42□□□□□ -0.42
USF1-209ENST00000529476 KLF4O43474 513 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 RNF13O43567 381 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 TRAF3IP2O43734 574 aaPredicted RBP12.42□□□□□ -0.42
USF1-209ENST00000529476 DEAF1O75398 565 aaPredicted RBP12.42□□□□□ -0.42
USF1-209ENST00000529476 SERPINI2O75830 405 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 TSPAN19P0C672 248 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 ZNF43P17038 809 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 DNAJA1P31689 397 aaKnown RBP12.42□□□□□ -0.42
USF1-209ENST00000529476 UQCRC1P31930 480 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 AQP2P41181 271 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 POU3F1Q03052 451 aaPredicted RBP12.42□□□□□ -0.42
USF1-209ENST00000529476 RPL18Q07020 188 aaKnown RBP12.42□□□□□ -0.42
USF1-209ENST00000529476 ZP4Q12836 540 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 FHL1Q13642 323 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 ATP6AP1Q15904 470 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 MICAQ29983 383 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 SLC25A35Q3KQZ1 300 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 ZNF770Q6IQ21 691 aaPredicted RBP12.42□□□□□ -0.42
USF1-209ENST00000529476 PGBD2Q6P3X8 592 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 LUZP2Q86TE4 346 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 OAFQ86UD1 273 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 UEVLDQ8IX04 471 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 ZNF610Q8N9Z0 462 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 LRTOMTQ8WZ04 291 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 TNFRSF13CQ96RJ3 184 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 PIGMQ9H3S5 423 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 FANCFQ9NPI8 374 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 PLSCR4Q9NRQ2 329 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 JKAMPQ9P055 326 aa12.42□□□□□ -0.42
USF1-209ENST00000529476 UNC119BA6NIH7 251 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 MRPL33O75394 65 aaKnown RBP12.41□□□□□ -0.42
USF1-209ENST00000529476 E2F6O75461 281 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 F13BP05160 661 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 CD8BP10966 210 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 FASP25445 335 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 IFNGR2P38484 337 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 SLC9A3P48764 834 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 HCFC1P51610 2035 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 CLDN17P56750 224 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 RPS4XP62701 263 aaKnown RBP12.41□□□□□ -0.42
USF1-209ENST00000529476 HMBOX1Q6NT76 420 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 C1orf94Q6P1W5 598 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 CASP12Q6UXS9 341 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 TFAP2EQ6VUC0 442 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 NHLRC1Q6VVB1 395 aa12.41□□□□□ -0.42
USF1-209ENST00000529476 AAED1Q7RTV5 226 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms