RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 ZNF471Q9BX82 626 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-214ENST00000528165 LGR4Q9BXB1 951 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 ESRP2Q9H6T0 727 aaKnown RBP13.42□□□□□ -0.26
CAPN1-214ENST00000528165 ADAP2Q9NPF8 381 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 FBXO34Q9NWN3 711 aa13.42□□□□□ -0.26
CAPN1-214ENST00000528165 GPN3Q9UHW5 284 aaPredicted RBP13.42□□□□□ -0.26
CAPN1-214ENST00000528165 A0A1B0GVT2 93 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 RPP14O95059 124 aaKnown RBP13.41□□□□□ -0.26
CAPN1-214ENST00000528165 NDUFB2O95178 105 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 PCCBP05166 539 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 UBE2IP63279 158 aaKnown RBP13.41□□□□□ -0.26
CAPN1-214ENST00000528165 PLA2G7Q13093 441 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 MLF2Q15773 248 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-214ENST00000528165 YOD1Q5VVQ6 348 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-214ENST00000528165 JMJD6Q6NYC1 403 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-214ENST00000528165 ERN2Q76MJ5 926 aaKnown RBP13.41□□□□□ -0.26
CAPN1-214ENST00000528165 OR2W3Q7Z3T1 314 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 DEFB128Q7Z7B8 93 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 ZNF227Q86WZ6 799 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 LDLRAD3Q86YD5 345 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 KCNRGQ8N5I3 272 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 COX18Q8N8Q8 333 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 OR8S1Q8NH09 359 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 RPS4Y2Q8TD47 263 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 DOK4Q8TEW6 326 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 ZNRF4Q8WWF5 429 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 INSM2Q96T92 566 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-214ENST00000528165 WDR13Q9H1Z4 485 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 POFUT1Q9H488 388 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 ZNF304Q9HCX3 659 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 CDV3Q9UKY7 258 aaKnown RBP13.41□□□□□ -0.26
CAPN1-214ENST00000528165 TP53BP1Q12888 1972 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-214ENST00000528165 OR14I1A6ND48 311 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 MEIS3P1A6NDR6 274 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 RPL4P36578 427 aaKnown RBP13.41□□□□□ -0.26
CAPN1-214ENST00000528165 MEOX2P50222 304 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 GUCA2AQ02747 115 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 FIGNL1Q6PIW4 674 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 OR4K14Q8NGD5 310 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 ZNF75AQ96N20 296 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 NMNAT3Q96T66 252 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 GPR174Q9BXC1 333 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 HCFC1R1Q9NWW0 138 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 CXXC1Q9P0U4 656 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-214ENST00000528165 UPB1Q9UBR1 384 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 ZNF230Q9UIE0 474 aaPredicted RBP13.41□□□□□ -0.26
CAPN1-214ENST00000528165 ADAM18Q9Y3Q7 739 aa13.41□□□□□ -0.26
CAPN1-214ENST00000528165 A0A087WV48 116 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 A0A0B4J2E0 115 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 A0A1B0GWA3 101 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 A0A1B0GX12 115 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 TMEM218A2RU14 115 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 GGT3PA6NGU5 568 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 CCL16O15467 120 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 BCL2L11O43521 198 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 OR2F2O95006 317 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 PMS2P2O95744 297 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 MAS1P04201 325 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 CD3DP04234 171 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 PPIAP62937 165 aaKnown RBP13.4□□□□□ -0.26
CAPN1-214ENST00000528165 OR2F1Q13607 317 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 FHL1Q13642 323 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 IRF4Q15306 451 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 TRMT12Q53H54 448 aaKnown RBP13.4□□□□□ -0.26
CAPN1-214ENST00000528165 GLT8D1Q68CQ7 371 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 ADAMTSL4Q6UY14 1074 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 SAMD14Q8IZD0 417 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-214ENST00000528165 SPAG16Q8N0X2 631 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 OR2L8Q8NGY9 312 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 OR5AK2Q8NH90 309 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 PHYHIPLQ96FC7 376 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 VRK1Q99986 396 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-214ENST00000528165 IL21RQ9HBE5 538 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 CTSFQ9UBX1 484 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 FBXL21Q9UKT6 434 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 PCDHB10Q9UN67 800 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 PQLC2LA1A4F0 135 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 OR5H14A6NHG9 310 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 MCIDASD6RGH6 385 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 NGFRP08138 427 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 OR4E1P0C645 316 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 SPI1P17947 270 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 PSMD4P55036 377 aaKnown RBP13.4□□□□□ -0.26
CAPN1-214ENST00000528165 PRMT2P55345 433 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 CDK3Q00526 305 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 TNFRSF17Q02223 184 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 SNTB1Q13884 538 aaKnown RBP13.4□□□□□ -0.26
CAPN1-214ENST00000528165 ZNF345Q14585 488 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 PAN3Q58A45 887 aaKnown RBP13.4□□□□□ -0.26
CAPN1-214ENST00000528165 LY6G6FQ5SQ64 297 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 FAM220AQ7Z4H9 259 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 CBLN2Q8IUK8 224 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 ZNF614Q8N883 585 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 STEAP2Q8NFT2 490 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 OR8D1Q8WZ84 308 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 DVL3Q92997 716 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-214ENST00000528165 PTCHD1Q96NR3 888 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 ALX4Q9H161 411 aaPredicted RBP13.4□□□□□ -0.26
CAPN1-214ENST00000528165 COMMD9Q9P000 198 aa13.4□□□□□ -0.26
CAPN1-214ENST00000528165 OR10H1Q9Y4A9 318 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms