RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 OR52E4Q8NGH9 312 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 FOXN4Q96NZ1 517 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 RSPO3Q9BXY4 272 aaPredicted RBP9.18□□□□□ -0.94
CPSF1-203ENST00000527916 OBP2BQ9NPH6 170 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 SLC17A5Q9NRA2 495 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 ARGLU1Q9NWB6 273 aaPredicted RBP9.18□□□□□ -0.94
CPSF1-203ENST00000527916 RASD1Q9Y272 281 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 AMDHD2Q9Y303 409 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 ATP23Q9Y6H3 246 aa9.18□□□□□ -0.94
CPSF1-203ENST00000527916 NOTCH1P46531 2555 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 LOC102725191A0A1B0GVB3 256 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 PRORSD1PA6NEY8 169 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 FTCDNL1E5RQL4 147 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 M0R1B8 84 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 NR5A2O00482 541 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 PNMTP11086 282 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 SLC6A2P23975 617 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 FOXG1P55316 489 aaPredicted RBP9.17□□□□□ -0.94
CPSF1-203ENST00000527916 EGR4Q05215 589 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 SPOCK1Q08629 439 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 ADRM1Q16186 407 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 RUNDC3AQ59EK9 446 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 METTL21CQ5VZV1 264 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 FAM91A1Q658Y4 838 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 UGT2A3Q6UWM9 527 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 DLEU7Q6UYE1 221 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 B3GLCTQ6Y288 498 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 NET1Q7Z628 596 aaPredicted RBP9.17□□□□□ -0.94
CPSF1-203ENST00000527916 DPP10Q8N608 796 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 ANKK1Q8NFD2 765 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 OR6S1Q8NH40 331 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 OR52N5Q8NH56 324 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 NFKBIDQ8NI38 313 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 DNAJA4Q8WW22 397 aaPredicted RBP9.17□□□□□ -0.94
CPSF1-203ENST00000527916 HPS1Q92902 700 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 ZNF385AQ96PM9 386 aaKnown RBP9.17□□□□□ -0.94
CPSF1-203ENST00000527916 ZNF607Q96SK3 696 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 SIKE1Q9BRV8 207 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 PTDSS2Q9BVG9 487 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 LINC00470Q9BZP3 86 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 ADPRHL2Q9NX46 363 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 LEF1Q9UJU2 399 aaPredicted RBP9.17□□□□□ -0.94
CPSF1-203ENST00000527916 TRIM33Q9UPN9 1127 aa9.17□□□□□ -0.94
CPSF1-203ENST00000527916 FAM157AC9JC47 383 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 SERPINB7O75635 380 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 VENTXO95231 258 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 AHSA1O95433 338 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 WNT11O96014 354 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 HOXB1P14653 301 aaPredicted RBP9.16□□□□□ -0.94
CPSF1-203ENST00000527916 H2AFXP16104 143 aaPredicted RBP9.16□□□□□ -0.94
CPSF1-203ENST00000527916 CHN2P52757 468 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 PRPS1P60891 318 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 SNRPD2P62316 118 aaKnown RBP9.16□□□□□ -0.94
CPSF1-203ENST00000527916 RBBP4Q09028 425 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 SCARB2Q14108 478 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 FAM69AQ5T7M9 428 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 ULK3Q6PHR2 472 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 GPAT4Q86UL3 456 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 EPHX4Q8IUS5 362 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 C10orf111Q8N326 155 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 LINC01356Q8N9X3 169 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 HIPK4Q8NE63 616 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 SEMA6DQ8NFY4 1073 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 MAGEE2Q8TD90 523 aaPredicted RBP9.16□□□□□ -0.94
CPSF1-203ENST00000527916 ZNF418Q8TF45 676 aaPredicted RBP9.16□□□□□ -0.94
CPSF1-203ENST00000527916 SLC38A4Q969I6 547 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 FBXO17Q96EF6 278 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 SLC47A1Q96FL8 570 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 ANKRD27Q96NW4 1050 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 ZNF317Q96PQ6 595 aaPredicted RBP9.16□□□□□ -0.94
CPSF1-203ENST00000527916 CPPED1Q9BRF8 314 aaPredicted RBP9.16□□□□□ -0.94
CPSF1-203ENST00000527916 BPESC1Q9GZL8 116 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 IKZF5Q9H5V7 419 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 ZNF385DQ9H6B1 395 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 MOV10Q9HCE1 1003 aaKnown RBP9.16□□□□□ -0.94
CPSF1-203ENST00000527916 RPS6KB2Q9UBS0 482 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 TESQ9UGI8 421 aaKnown RBP9.16□□□□□ -0.94
CPSF1-203ENST00000527916 RCE1Q9Y256 329 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 NDUFAF1Q9Y375 327 aa9.16□□□□□ -0.94
CPSF1-203ENST00000527916 A0A087WUJ7 227 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 A0A0G2JK05 382 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 A0A1B0GWA3 101 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 TMEM89A2RUT3 159 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 RPL36A-HNRNPH2H7BZ11 118 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 TPST1O60507 370 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 EDF1O60869 148 aaKnown RBP9.15□□□□□ -0.94
CPSF1-203ENST00000527916 MFN2O95140 757 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 ZNF43P17038 809 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 HTR2AP28223 471 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 RPS5P46782 204 aaKnown RBP9.15□□□□□ -0.94
CPSF1-203ENST00000527916 PCBP3P57721 371 aaKnown RBP9.15□□□□□ -0.94
CPSF1-203ENST00000527916 HOXC5Q00444 222 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 MFSD13AQ14CX5 517 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 C3orf36Q3SXR2 165 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 ALG10BQ5I7T1 473 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 PRR31Q5SQ13 230 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 SWT1Q5T5J6 900 aaKnown RBP9.15□□□□□ -0.94
CPSF1-203ENST00000527916 SLC46A3Q7Z3Q1 461 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 ADPRHL1Q8NDY3 354 aa9.15□□□□□ -0.94
CPSF1-203ENST00000527916 FAM216AQ8WUB2 273 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms