RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 TSPAN32Q96QS1 320 aa15.98■□□□□ 0.15
USH1C-205ENST00000527020 LAT2Q9GZY6 243 aa15.98■□□□□ 0.15
USH1C-205ENST00000527020 ZNF281Q9Y2X9 895 aa15.98■□□□□ 0.15
USH1C-205ENST00000527020 ALPK2Q86TB3 2170 aa15.98■□□□□ 0.15
USH1C-205ENST00000527020 ADAMTS20P59510 1910 aa15.98■□□□□ 0.15
USH1C-205ENST00000527020 ACOD1A6NK06 481 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 RHPN2P1A8MT19 583 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 HNRNPKP61978 463 aaKnown RBP eCLIP15.97■□□□□ 0.15
USH1C-205ENST00000527020 NTRK2Q16620 822 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 YIF1BQ5BJH7 314 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 MESTQ5EB52 335 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 KRT74Q7RTS7 529 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 C9orf40Q8IXQ3 194 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 TIGD4Q8IY51 512 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 TDHQ8IZJ6 230 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 OR1L3Q8NH93 324 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 MAP6Q96JE9 813 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 GAL3ST4Q96RP7 486 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 PHF7Q9BWX1 381 aaPredicted RBP15.97■□□□□ 0.15
USH1C-205ENST00000527020 SLC25A18Q9H1K4 315 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 TCRBV16S1A1N1A0A5B0 115 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 TMEM72A0PK05 275 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 CDC14CA4D256 554 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 ANKRD61A6NGH8 418 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 ZNF879B4DU55 563 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 H7C1C5 153 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 UPK3AO75631 287 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 ADRB1P08588 477 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 IGFBP4P22692 258 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 LCN6P62502 163 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 EBPQ15125 230 aaKnown RBP15.97■□□□□ 0.15
USH1C-205ENST00000527020 TOMM34Q15785 309 aaPredicted RBP15.97■□□□□ 0.15
USH1C-205ENST00000527020 RNASE12Q5GAN4 147 aaKnown RBP15.97■□□□□ 0.15
USH1C-205ENST00000527020 SLC35F3Q8IY50 421 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 CADM4Q8NFZ8 388 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 PHYHIPQ92561 330 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 MRM2Q9UI43 246 aaKnown RBP15.97■□□□□ 0.15
USH1C-205ENST00000527020 MOKQ9UQ07 419 aa15.97■□□□□ 0.15
USH1C-205ENST00000527020 IGHV1OR21-1A0A087WYE8 117 aa15.96■□□□□ 0.15
USH1C-205ENST00000527020 GMFGO60234 142 aa15.96■□□□□ 0.15
USH1C-205ENST00000527020 ABHD16AO95870 558 aa15.96■□□□□ 0.15
USH1C-205ENST00000527020 OR8G3PP0DMU2 310 aa15.96■□□□□ 0.15
USH1C-205ENST00000527020 EVI2BP34910 448 aa15.96■□□□□ 0.15
USH1C-205ENST00000527020 GZMKP49863 264 aa15.96■□□□□ 0.15
USH1C-205ENST00000527020 HSD11B2P80365 405 aa15.96■□□□□ 0.15
USH1C-205ENST00000527020 ZP2Q05996 745 aa15.96■□□□□ 0.15
USH1C-205ENST00000527020 FAPQ12884 760 aa15.96■□□□□ 0.15
USH1C-205ENST00000527020 SMAD4Q13485 552 aaKnown RBP15.96■□□□□ 0.15
USH1C-205ENST00000527020 ELAVL1Q15717 326 aaKnown RBP15.96■□□□□ 0.15
USH1C-205ENST00000527020 SIAH3Q8IW03 269 aa15.96■□□□□ 0.15
USH1C-205ENST00000527020 ZNF563Q8TA94 476 aa15.96■□□□□ 0.15
USH1C-205ENST00000527020 MVB12AQ96EY5 273 aa15.96■□□□□ 0.15
USH1C-205ENST00000527020 ZFP3Q96NJ6 502 aa15.96■□□□□ 0.15
USH1C-205ENST00000527020 SRA1Q9HD15 236 aaKnown RBP15.96■□□□□ 0.15
USH1C-205ENST00000527020 CAMK2AQ9UQM7 478 aa15.96■□□□□ 0.15
USH1C-205ENST00000527020 TSPAN2O60636 221 aa15.96■□□□□ 0.14
USH1C-205ENST00000527020 RPL6Q02878 288 aaKnown RBP15.96■□□□□ 0.14
USH1C-205ENST00000527020 VWA2Q5GFL6 755 aa15.96■□□□□ 0.14
USH1C-205ENST00000527020 FAM199XQ6PEV8 388 aaPredicted RBP15.96■□□□□ 0.14
USH1C-205ENST00000527020 NUP54Q7Z3B4 507 aa15.96■□□□□ 0.14
USH1C-205ENST00000527020 CDC20BQ86Y33 519 aa15.96■□□□□ 0.14
USH1C-205ENST00000527020 AKAP1Q92667 903 aaKnown RBP eCLIP15.96■□□□□ 0.14
USH1C-205ENST00000527020 ELF4Q99607 663 aaPredicted RBP15.96■□□□□ 0.14
USH1C-205ENST00000527020 TSPAN10Q9H1Z9 355 aaPredicted RBP15.96■□□□□ 0.14
USH1C-205ENST00000527020 C12orf10Q9HB07 376 aa15.96■□□□□ 0.14
USH1C-205ENST00000527020 MRPS7Q9Y2R9 242 aaKnown RBP15.96■□□□□ 0.14
USH1C-205ENST00000527020 CPAMD8Q8IZJ3 1885 aa15.95■□□□□ 0.14
USH1C-205ENST00000527020 A0A0A6YYJ9 748 aa15.95■□□□□ 0.14
USH1C-205ENST00000527020 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.95■□□□□ 0.14
USH1C-205ENST00000527020 PIAS2O75928 621 aa15.95■□□□□ 0.14
USH1C-205ENST00000527020 C1QBP02746 253 aa15.95■□□□□ 0.14
USH1C-205ENST00000527020 CSNK1EP49674 416 aaKnown RBP15.95■□□□□ 0.14
USH1C-205ENST00000527020 STPG1Q5TH74 334 aa15.95■□□□□ 0.14
USH1C-205ENST00000527020 C1QL3Q5VWW1 255 aa15.95■□□□□ 0.14
USH1C-205ENST00000527020 PRSS45Q7RTY3 260 aa15.95■□□□□ 0.14
USH1C-205ENST00000527020 NANOGNBQ7Z5D8 188 aa15.95■□□□□ 0.14
USH1C-205ENST00000527020 MARCH3Q86UD3 253 aa15.95■□□□□ 0.14
USH1C-205ENST00000527020 IZUMO1Q8IYV9 350 aa15.95■□□□□ 0.14
USH1C-205ENST00000527020 CMTM4Q8IZR5 234 aa15.95■□□□□ 0.14
USH1C-205ENST00000527020 OR6V1Q8N148 313 aa15.95■□□□□ 0.14
USH1C-205ENST00000527020 GRHPRQ9UBQ7 328 aa15.95■□□□□ 0.14
USH1C-205ENST00000527020 TRAV6A0A075B6T7 132 aa15.94■□□□□ 0.14
USH1C-205ENST00000527020 TVP23AA6NH52 213 aa15.94■□□□□ 0.14
USH1C-205ENST00000527020 SMLR1H3BR10 107 aa15.94■□□□□ 0.14
USH1C-205ENST00000527020 HCRTR2O43614 444 aa15.94■□□□□ 0.14
USH1C-205ENST00000527020 GSTZ1O43708 216 aaPredicted RBP15.94■□□□□ 0.14
USH1C-205ENST00000527020 SCO2O43819 266 aa15.94■□□□□ 0.14
USH1C-205ENST00000527020 RPP14O95059 124 aaKnown RBP15.94■□□□□ 0.14
USH1C-205ENST00000527020 BGLAPP02818 100 aa15.94■□□□□ 0.14
USH1C-205ENST00000527020 FOLR1P15328 257 aa15.94■□□□□ 0.14
USH1C-205ENST00000527020 S100A1P23297 94 aa15.94■□□□□ 0.14
USH1C-205ENST00000527020 ERP29P30040 261 aaKnown RBP15.94■□□□□ 0.14
USH1C-205ENST00000527020 CSF2RBP32927 897 aa15.94■□□□□ 0.14
USH1C-205ENST00000527020 CCDC92Q53HC0 331 aaPredicted RBP15.94■□□□□ 0.14
USH1C-205ENST00000527020 EMC4Q5J8M3 183 aa15.94■□□□□ 0.14
USH1C-205ENST00000527020 UBE2NLQ5JXB2 153 aa15.94■□□□□ 0.14
USH1C-205ENST00000527020 HES5Q5TA89 166 aa15.94■□□□□ 0.14
USH1C-205ENST00000527020 BCL2L15Q5TBC7 163 aa15.94■□□□□ 0.14
USH1C-205ENST00000527020 LIPNQ5VXI9 398 aa15.94■□□□□ 0.14
USH1C-205ENST00000527020 SLC6A19Q695T7 634 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms