RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 AQP7P3A6NL99 342 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 GJE1A6NN92 205 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 TLX2O43763 284 aaPredicted RBP12.88□□□□□ -0.35
COLCA2-202ENST00000526216 ENTPD6O75354 484 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 IGHMP01871 453 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 HMGN1P05114 100 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 RPSAP08865 295 aaKnown RBP12.88□□□□□ -0.35
COLCA2-202ENST00000526216 HIST1H1CP16403 213 aaKnown RBP12.88□□□□□ -0.35
COLCA2-202ENST00000526216 GTF2E2P29084 291 aaKnown RBP12.88□□□□□ -0.35
COLCA2-202ENST00000526216 AGFG1P52594 562 aaKnown RBP12.88□□□□□ -0.35
COLCA2-202ENST00000526216 CHN2P52757 468 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 PUDPQ08623 228 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 MESTQ5EB52 335 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 HBMQ6B0K9 141 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 PAQR6Q6TCH4 344 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 ZNF786Q8N393 782 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 SLC37A3Q8NCC5 494 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 LSM14AQ8ND56 463 aaKnown RBP12.88□□□□□ -0.35
COLCA2-202ENST00000526216 BBS1Q8NFJ9 593 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 OR10D3Q8NH80 312 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 ZNF519Q8TB69 540 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 TMEM163Q8TC26 289 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 HCAR1Q9BXC0 346 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 MED20Q9H944 212 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 ZNF346Q9UL40 294 aaKnown RBP12.88□□□□□ -0.35
COLCA2-202ENST00000526216 ZMIZ1Q9ULJ6 1067 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 BAIAP2Q9UQB8 552 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 B3GALT5Q9Y2C3 310 aa12.88□□□□□ -0.35
COLCA2-202ENST00000526216 CACNA1GO43497 2377 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 A0A1B0GVC2 190 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 FAM183AA6NL82 134 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 EIF4E1BA6NMX2 242 aaKnown RBP12.87□□□□□ -0.35
COLCA2-202ENST00000526216 KDM4EB2RXH2 506 aaPredicted RBP12.87□□□□□ -0.35
COLCA2-202ENST00000526216 NPIPA5E9PKD4 350 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 SLC1A7O00341 560 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 RNF13O43567 381 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 TRAF3IP2O43734 574 aaPredicted RBP12.87□□□□□ -0.35
COLCA2-202ENST00000526216 XPNPEP2O43895 674 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 SERPINI2O75830 405 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 SMNDC1O75940 238 aaKnown RBP eCLIP12.87□□□□□ -0.356e-8■■■□□ 19.1
COLCA2-202ENST00000526216 ACTL6AO96019 429 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 LYNP07948 512 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 APEHP13798 732 aaKnown RBP12.87□□□□□ -0.35
COLCA2-202ENST00000526216 ENPP1P22413 925 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 AHCYP23526 432 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 NOS3P29474 1203 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 EIF1AXP47813 144 aaKnown RBP12.87□□□□□ -0.35
COLCA2-202ENST00000526216 NUDT6P53370 316 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 RAC3P60763 192 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 CSNK2A1P68400 391 aaPredicted RBP12.87□□□□□ -0.35
COLCA2-202ENST00000526216 HSF1Q00613 529 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 TEKQ02763 1124 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.87□□□□□ -0.35
COLCA2-202ENST00000526216 TOP3AQ13472 1001 aaPredicted RBP12.87□□□□□ -0.35
COLCA2-202ENST00000526216 CRMP1Q14194 572 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 MELKQ14680 651 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 INAQ16352 499 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 BCL2A1Q16548 175 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 ACKR1Q16570 336 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 AADACL4Q5VUY2 407 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 ARHGAP11AQ6P4F7 1023 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 PLXDC2Q6UX71 529 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 FGD2Q7Z6J4 655 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 FAM26EQ8N5C1 309 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 SDR9C7Q8NEX9 313 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 OR8J1Q8NGP2 316 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 OR4K13Q8NH42 304 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 TRUB1Q8WWH5 349 aaKnown RBP12.87□□□□□ -0.35
COLCA2-202ENST00000526216 HDAC2Q92769 488 aaKnown RBP12.87□□□□□ -0.35
COLCA2-202ENST00000526216 ZNF566Q969W8 418 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 PNPLA2Q96AD5 504 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 WDYHV1Q96HA8 205 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 TXNDC15Q96J42 360 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 SLC38A2Q96QD8 506 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 TIMP4Q99727 224 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 PAK1IP1Q9NWT1 392 aaPredicted RBP12.87□□□□□ -0.35
COLCA2-202ENST00000526216 TUBD1Q9UJT1 453 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 NPIPA1Q9UND3 350 aa12.87□□□□□ -0.35
COLCA2-202ENST00000526216 MAP1BP46821 2468 aaKnown RBP12.86□□□□□ -0.35
COLCA2-202ENST00000526216 ATMQ13315 3056 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 ITPR1Q14643 2758 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 TRIM64A6NGJ6 449 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 DNPH1O43598 174 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 OR6A2O95222 327 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 SDHAP31040 664 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 CDKN2AP42771 156 aaKnown RBP12.86□□□□□ -0.35
COLCA2-202ENST00000526216 CARD18P57730 90 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 SRYQ05066 204 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 RUNX1T1Q06455 604 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 KRR1Q13601 381 aaKnown RBP12.86□□□□□ -0.35
COLCA2-202ENST00000526216 OCLNQ16625 522 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 SLC25A30Q5SVS4 291 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 ARMC4Q5T2S8 1044 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 ABLIM2Q6H8Q1 611 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 C19orf48Q6RUI8 117 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 CYB561A3Q8NBI2 242 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 NPEPL1Q8NDH3 523 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 OR52E2Q8NGJ4 325 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 ASB10Q8WXI3 467 aa12.86□□□□□ -0.35
COLCA2-202ENST00000526216 ROBO4Q8WZ75 1007 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms