RNA–Protein interactions for RNA: ENST00000525688.5

CD44-220, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 560 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-220ENST00000525688 PRSS1P07477 247 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 GSTA2P09210 222 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 GOLGA8HP0CJ92 632 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 HSMCR30P0CW71 290 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 ZNF26P17031 533 aaPredicted RBP4.07□□□□□ -1.76
CD44-220ENST00000525688 CFL1P23528 166 aaKnown RBP4.07□□□□□ -1.76
CD44-220ENST00000525688 CD82P27701 267 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 TIMP3P35625 211 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 CFHR2P36980 270 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 FEN1P39748 380 aaKnown RBP4.07□□□□□ -1.76
CD44-220ENST00000525688 ACADSBP45954 432 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 NOVP48745 357 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 MRPL19P49406 292 aaKnown RBP4.07□□□□□ -1.76
CD44-220ENST00000525688 UCNP55089 124 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 ACTBP60709 375 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 ACTA2P62736 377 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 ACTG1P63261 375 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 ACTG2P63267 376 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 ACTC1P68032 377 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 ACTA1P68133 377 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 LCN2P80188 198 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 CDR2Q01850 454 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 MADCAM1Q13477 382 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 RBM39Q14498 530 aaKnown RBP4.07□□□□□ -1.76
CD44-220ENST00000525688 C5orf47Q569G3 176 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 THOC7Q6I9Y2 204 aaKnown RBP4.07□□□□□ -1.76
CD44-220ENST00000525688 CLEC18BQ6UXF7 455 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 ARHGAP18Q8N392 663 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 FGFRL1Q8N441 504 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 FAM89BQ8N5H3 189 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 CLDN19Q8N6F1 224 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 CCDC185Q8N715 623 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 LRTM2Q8N967 370 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 RNF149Q8NC42 400 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 OR1L6Q8NGR2 347 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 OR4C3Q8NH37 302 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 OR1L3Q8NH93 324 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 NUBPLQ8TB37 319 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 TEX47Q8TBZ9 253 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 CD99L2Q8TCZ2 262 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 SLC35B4Q969S0 331 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 MYLPFQ96A32 169 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 ZNF524Q96C55 264 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 C9orf72Q96LT7 481 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 C10orf90Q96M02 699 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 SLC38A2Q96QD8 506 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 MCRIP2Q9BUT9 160 aaKnown RBP4.07□□□□□ -1.76
CD44-220ENST00000525688 SLC38A1Q9H2H9 487 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 RHOJQ9H4E5 214 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 EGLN3Q9H6Z9 239 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 NYAP2Q9P242 653 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 CLN8Q9UBY8 286 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 SLC12A6Q9UHW9 1150 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 MRM2Q9UI43 246 aaKnown RBP4.07□□□□□ -1.76
CD44-220ENST00000525688 FBXL4Q9UKA2 621 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 MRTO4Q9UKD2 239 aaKnown RBP4.07□□□□□ -1.76
CD44-220ENST00000525688 ELF5Q9UKW6 265 aaPredicted RBP4.07□□□□□ -1.76
CD44-220ENST00000525688 URGCP-MRPS24S4R325 110 aa4.07□□□□□ -1.76
CD44-220ENST00000525688 MYH8P13535 1937 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 RLFQ13129 1914 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 LOC105371267A0A1B0GV96 52 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 TMEM213A2RRL7 107 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 GOLGA6L4A6NEF3 574 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 YJEFN3A6XGL0 299 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 GOLGA6L19H0YKK7 550 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 SMLR1H3BR10 107 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 RFXANKO14593 260 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 SIVA1O15304 175 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 EMC8O43402 210 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 CNMDO75829 334 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 STK17BO94768 372 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 CLDN9O95484 217 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 EML2O95834 649 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 FADS2O95864 444 aaKnown RBP4.06□□□□□ -1.76
CD44-220ENST00000525688 GAPDHP04406 335 aaKnown RBP4.06□□□□□ -1.76
CD44-220ENST00000525688 IL6P05231 212 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 KRT7P08729 469 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 CD3GP09693 182 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 CTXN2P0C2S0 81 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 FAM157CP0CG43 387 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 MAGP20916 626 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 ANOS1P23352 680 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 RBMS1P29558 406 aaKnown RBP4.06□□□□□ -1.76
CD44-220ENST00000525688 ACTR1BP42025 376 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 SLC1A4P43007 532 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 TGM4P49221 684 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 DUSP3P51452 185 aaPredicted RBP4.06□□□□□ -1.76
CD44-220ENST00000525688 DNA2P51530 1060 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 PSMD7P51665 324 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 CEBPGP53567 150 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 ERVK-25P63136 954 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 SRSF9Q13242 221 aaKnown RBP eCLIP4.06□□□□□ -1.76
CD44-220ENST00000525688 TEAD2Q15562 447 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 PTPN20Q4JDL3 420 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 GPR107Q5VW38 600 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 RTL6Q6ICC9 239 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 ULK3Q6PHR2 472 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 GCNT7Q6ZNI0 430 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 COX8CQ7Z4L0 72 aa4.06□□□□□ -1.76
CD44-220ENST00000525688 ACOT1Q86TX2 421 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms