RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 CXorf40AQ8TE69 158 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 PDCD6IPQ8WUM4 868 aaKnown RBP3.01□□□□□ -1.93
CD44-219ENST00000525685 PIH1D2Q8WWB5 315 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 C1orf54Q8WWF1 131 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 PHYHIPQ92561 330 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 IMP4Q96G21 291 aaKnown RBP3.01□□□□□ -1.93
CD44-219ENST00000525685 SERAC1Q96JX3 654 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 MCCC1Q96RQ3 725 aaPredicted RBP3.01□□□□□ -1.93
CD44-219ENST00000525685 TRIB3Q96RU7 358 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 ATP6V0BQ99437 205 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 VAT1Q99536 393 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 KLF6Q99612 283 aaPredicted RBP3.01□□□□□ -1.93
CD44-219ENST00000525685 C19orf43Q9BQ61 176 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 SLC39A3Q9BRY0 314 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 SLC25A51Q9H1U9 297 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 GBA3Q9H227 469 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 ADGRL4Q9HBW9 690 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 NRN1Q9NPD7 142 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 TIGARQ9NQ88 270 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 DHRS4-AS1Q9P1J3 65 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 FETUBQ9UGM5 382 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 RSPH14Q9UHP6 348 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 APPL1Q9UKG1 709 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 DNPEPQ9ULA0 475 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 RNF24Q9Y225 148 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 ATG4BQ9Y4P1 393 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 FKBP7Q9Y680 259 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 LRP4O75096 1905 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 ZDBF2Q9HCK1 2354 aa3.01□□□□□ -1.93
CD44-219ENST00000525685 ZNF106Q9H2Y7 1883 aaKnown RBP3.01□□□□□ -1.93
CD44-219ENST00000525685 A0A0U1RQS6 177 aa3□□□□□ -1.93
CD44-219ENST00000525685 C1orf232A0A0U1RR37 186 aa3□□□□□ -1.93
CD44-219ENST00000525685 A0A1B0GTQ1 180 aa3□□□□□ -1.93
CD44-219ENST00000525685 LOC285095A0A1B0GVY8 99 aa3□□□□□ -1.93
CD44-219ENST00000525685 A8MX80 341 aa3□□□□□ -1.93
CD44-219ENST00000525685 SRRM5B3KS81 715 aa3□□□□□ -1.93
CD44-219ENST00000525685 PRAMEF26H0Y7S4 382 aa3□□□□□ -1.93
CD44-219ENST00000525685 PSMD11O00231 422 aa3□□□□□ -1.93
CD44-219ENST00000525685 CDX4O14627 284 aaPredicted RBP3□□□□□ -1.93
CD44-219ENST00000525685 SRPX2O60687 465 aaPredicted RBP3□□□□□ -1.93
CD44-219ENST00000525685 ZNF189O75820 626 aaPredicted RBP3□□□□□ -1.93
CD44-219ENST00000525685 SOD1P00441 154 aa3□□□□□ -1.93
CD44-219ENST00000525685 FGGP02679 453 aa3□□□□□ -1.93
CD44-219ENST00000525685 SLC4A1P02730 911 aa3□□□□□ -1.93
CD44-219ENST00000525685 PCCBP05166 539 aa3□□□□□ -1.93
CD44-219ENST00000525685 SNRPCP09234 159 aaKnown RBP3□□□□□ -1.93
CD44-219ENST00000525685 PIRTP0C851 137 aa3□□□□□ -1.93
CD44-219ENST00000525685 ETS1P14921 441 aa3□□□□□ -1.93
CD44-219ENST00000525685 ZNF30P17039 623 aa3□□□□□ -1.93
CD44-219ENST00000525685 UCP1P25874 307 aa3□□□□□ -1.93
CD44-219ENST00000525685 MSNP26038 577 aaKnown RBP3□□□□□ -1.93
CD44-219ENST00000525685 AKT2P31751 481 aa3□□□□□ -1.93
CD44-219ENST00000525685 ADRA1AP35348 466 aa3□□□□□ -1.93
CD44-219ENST00000525685 NPY2RP49146 381 aa3□□□□□ -1.93
CD44-219ENST00000525685 STC1P52823 247 aa3□□□□□ -1.93
CD44-219ENST00000525685 C21orf59P57076 290 aa3□□□□□ -1.93
CD44-219ENST00000525685 PFN3P60673 137 aa3□□□□□ -1.93
CD44-219ENST00000525685 RPL26P61254 145 aaKnown RBP3□□□□□ -1.93
CD44-219ENST00000525685 GNG11P61952 73 aa3□□□□□ -1.93
CD44-219ENST00000525685 IL9RQ01113 521 aa3□□□□□ -1.93
CD44-219ENST00000525685 SNX1Q13596 522 aa3□□□□□ -1.93
CD44-219ENST00000525685 SLC10A1Q14973 349 aa3□□□□□ -1.93
CD44-219ENST00000525685 NUMA1Q14980 2115 aa3□□□□□ -1.93
CD44-219ENST00000525685 CDKN3Q16667 212 aa3□□□□□ -1.93
CD44-219ENST00000525685 KCTD19Q17RG1 926 aaPredicted RBP3□□□□□ -1.93
CD44-219ENST00000525685 FAM219BQ5XKK7 198 aa3□□□□□ -1.93
CD44-219ENST00000525685 KCTD16Q68DU8 428 aa3□□□□□ -1.93
CD44-219ENST00000525685 RHBDD2Q6NTF9 364 aa3□□□□□ -1.93
CD44-219ENST00000525685 PLBD1Q6P4A8 553 aa3□□□□□ -1.93
CD44-219ENST00000525685 UNC5DQ6UXZ4 953 aa3□□□□□ -1.93
CD44-219ENST00000525685 RFLNAQ6ZTI6 216 aa3□□□□□ -1.93
CD44-219ENST00000525685 CCDC80Q76M96 950 aa3□□□□□ -1.93
CD44-219ENST00000525685 PID1Q7Z2X4 250 aa3□□□□□ -1.93
CD44-219ENST00000525685 HSD11B1LQ7Z5J1 315 aa3□□□□□ -1.93
CD44-219ENST00000525685 TSEN54Q7Z6J9 526 aaKnown RBP3□□□□□ -1.93
CD44-219ENST00000525685 ADAMTSL2Q86TH1 951 aa3□□□□□ -1.93
CD44-219ENST00000525685 ZBED8Q8IZ13 594 aa3□□□□□ -1.93
CD44-219ENST00000525685 LRRC17Q8N6Y2 441 aa3□□□□□ -1.93
CD44-219ENST00000525685 PRELID2Q8N945 189 aa3□□□□□ -1.93
CD44-219ENST00000525685 IPMKQ8NFU5 416 aa3□□□□□ -1.93
CD44-219ENST00000525685 BRSK1Q8TDC3 778 aa3□□□□□ -1.93
CD44-219ENST00000525685 ACTRT1Q8TDG2 376 aa3□□□□□ -1.93
CD44-219ENST00000525685 ANKRD49Q8WVL7 239 aa3□□□□□ -1.93
CD44-219ENST00000525685 ZNF75CPQ92670 426 aaPredicted RBP3□□□□□ -1.93
CD44-219ENST00000525685 TMEM45BQ96B21 275 aa3□□□□□ -1.93
CD44-219ENST00000525685 NUS1Q96E22 293 aa3□□□□□ -1.93
CD44-219ENST00000525685 MS4A14Q96JA4 679 aa3□□□□□ -1.93
CD44-219ENST00000525685 BMFQ96LC9 184 aa3□□□□□ -1.93
CD44-219ENST00000525685 NSMCE2Q96MF7 247 aa3□□□□□ -1.93
CD44-219ENST00000525685 LYSMD1Q96S90 227 aa3□□□□□ -1.93
CD44-219ENST00000525685 COQ7Q99807 217 aa3□□□□□ -1.93
CD44-219ENST00000525685 TMEM121Q9BTD3 319 aa3□□□□□ -1.93
CD44-219ENST00000525685 APOOQ9BUR5 198 aa3□□□□□ -1.93
CD44-219ENST00000525685 FICDQ9BVA6 458 aa3□□□□□ -1.93
CD44-219ENST00000525685 SLC17A9Q9BYT1 436 aa3□□□□□ -1.93
CD44-219ENST00000525685 FRMD8P1Q9BZ68 369 aaPredicted RBP3□□□□□ -1.93
CD44-219ENST00000525685 SYTL2Q9HCH5 934 aa3□□□□□ -1.93
CD44-219ENST00000525685 AMBNQ9NP70 447 aa3□□□□□ -1.93
CD44-219ENST00000525685 TMEM9BQ9NQ34 198 aa3□□□□□ -1.93
CD44-219ENST00000525685 ZNF581Q9P0T4 197 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms