RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 RFPL4AA6NLU0 287 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 CCT8L1PA6NM43 557 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 E5RI56 91 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 NEDD8-MDP1E9PL57 170 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 RFPL4AL1F8VTS6 287 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 CST8O60676 142 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 DPM1O60762 260 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 ZNF253O75346 499 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 SCO1O75880 301 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 GOT2P00505 430 aaKnown RBP2.95□□□□□ -1.94
CD44-217ENST00000525348 AGTP01019 485 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 IFNGP01579 166 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 TRBC1P01850 177 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 TNNC2P02585 160 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 KRT8P05787 483 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 PROS1P07225 676 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 LINC00614P0C842 121 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 RNH1P13489 461 aaKnown RBP2.95□□□□□ -1.94
CD44-217ENST00000525348 CCL2P13500 99 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 NQO2P16083 231 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 XRCC1P18887 633 aaPredicted RBP2.95□□□□□ -1.94
CD44-217ENST00000525348 MAGP20916 626 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 PTNP21246 168 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 CNR1P21554 472 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 F8A1P23610 371 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 HSD11B1P28845 292 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 TGFBR2P37173 567 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 MAGEB1P43366 347 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 RPS5P46782 204 aaKnown RBP2.95□□□□□ -1.94
CD44-217ENST00000525348 CEBPDP49716 269 aaPredicted RBP2.95□□□□□ -1.94
CD44-217ENST00000525348 TPMTP51580 245 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 PKNOX1P55347 436 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 UBE2G2P60604 165 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 RPS8P62241 208 aaKnown RBP2.95□□□□□ -1.94
CD44-217ENST00000525348 SPIBQ01892 262 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 SEMG2Q02383 582 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 ZNF45Q02386 682 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 FOLH1Q04609 750 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 RBBP4Q09028 425 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 OVGP1Q12889 678 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 GPR50Q13585 617 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 RUNX3Q13761 415 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 DGCR6Q14129 220 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 TFDP1Q14186 410 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 HEPACAMQ14CZ8 416 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 TRAM2Q15035 370 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 KARSQ15046 597 aaKnown RBP2.95□□□□□ -1.94
CD44-217ENST00000525348 SLC15A2Q16348 729 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 PPP1R3AQ16821 1122 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 PRR30Q53SZ7 412 aaPredicted RBP2.95□□□□□ -1.94
CD44-217ENST00000525348 ARMCX4Q5H9R4 360 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 EOGTQ5NDL2 527 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 TCHHL1Q5QJ38 904 aaPredicted RBP2.95□□□□□ -1.94
CD44-217ENST00000525348 LRRC38Q5VT99 294 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 ETFRF1Q6IPR1 90 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 CCDC137Q6PK04 289 aaKnown RBP2.95□□□□□ -1.94
CD44-217ENST00000525348 CYP4Z1Q86W10 505 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 STEAP2Q8NFT2 490 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 OR10A7Q8NGE5 316 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 OR6T1Q8NGN1 323 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 OR6Q1Q8NGQ2 317 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 PSMA8Q8TAA3 256 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 GPR148Q8TDV2 347 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 TSEN15Q8WW01 171 aaKnown RBP2.95□□□□□ -1.94
CD44-217ENST00000525348 CKAP2Q8WWK9 683 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 CORO2AQ92828 525 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 BORCS5Q969J3 196 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 FAM162AQ96A26 154 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 EXOSC8Q96B26 276 aaKnown RBP2.95□□□□□ -1.94
CD44-217ENST00000525348 TPD52L3Q96J77 140 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 PLEKHA8Q96JA3 519 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 FAM210BQ96KR6 192 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 PACRGQ96M98 296 aaPredicted RBP2.95□□□□□ -1.94
CD44-217ENST00000525348 ZNF285Q96NJ3 590 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 SERPINB12Q96P63 405 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 MAPKAP1Q9BPZ7 522 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 MRPL13Q9BYD1 178 aaKnown RBP2.95□□□□□ -1.94
CD44-217ENST00000525348 PRRG3Q9BZD7 231 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 WWP1Q9H0M0 922 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 RMND5AQ9H871 391 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 ECT2Q9H8V3 914 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 CAB39LQ9H9S4 337 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 RNPEPL1Q9HAU8 725 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 CD209Q9NNX6 404 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 NGBQ9NPG2 151 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 SLCO1C1Q9NYB5 712 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 ERVK-18Q9QC07 812 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 CHRNA9Q9UGM1 479 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 GNPTGQ9UJJ9 305 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 DNAJC12Q9UKB3 198 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 MGAT4AQ9UM21 535 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 NDRG2Q9UN36 371 aaKnown RBP2.95□□□□□ -1.94
CD44-217ENST00000525348 CELA1Q9UNI1 258 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 POFUT2Q9Y2G5 429 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 MMACHCQ9Y4U1 282 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 MAB21L2Q9Y586 359 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 TNS1Q9HBL0 1735 aaKnown RBP2.95□□□□□ -1.94
CD44-217ENST00000525348 NKTRP30414 1462 aaKnown RBP2.95□□□□□ -1.94
CD44-217ENST00000525348 FYCO1Q9BQS8 1478 aa2.95□□□□□ -1.94
CD44-217ENST00000525348 UNC13BO14795 1591 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms