RNA–Protein interactions for RNA: ENST00000524827.5

CSTF3-206, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 3 BASIC

Gene CSTF3, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-206ENST00000524827 ATG16L1Q676U5 607 aa11.89□□□□□ -0.51
CSTF3-206ENST00000524827 USP43Q70EL4 1123 aa11.89□□□□□ -0.51
CSTF3-206ENST00000524827 CCDC36Q8IYA8 594 aa11.89□□□□□ -0.51
CSTF3-206ENST00000524827 RIBC1Q8N443 379 aaPredicted RBP11.89□□□□□ -0.51
CSTF3-206ENST00000524827 EIF1ADQ8N9N8 165 aaKnown RBP11.89□□□□□ -0.51
CSTF3-206ENST00000524827 OR52P1PQ8NH57 321 aa11.89□□□□□ -0.51
CSTF3-206ENST00000524827 RDH5Q92781 318 aa11.89□□□□□ -0.51
CSTF3-206ENST00000524827 YIPF5Q969M3 257 aa11.89□□□□□ -0.51
CSTF3-206ENST00000524827 MS4A3Q96HJ5 214 aa11.89□□□□□ -0.51
CSTF3-206ENST00000524827 TEX37Q96LM6 180 aa11.89□□□□□ -0.51
CSTF3-206ENST00000524827 PANX1Q96RD7 426 aa11.89□□□□□ -0.51
CSTF3-206ENST00000524827 SYT3Q9BQG1 590 aa11.89□□□□□ -0.51
CSTF3-206ENST00000524827 RBM4Q9BWF3 364 aaKnown RBP11.89□□□□□ -0.51
CSTF3-206ENST00000524827 MS4A5Q9H3V2 200 aa11.89□□□□□ -0.51
CSTF3-206ENST00000524827 ZNF275Q9NSD4 429 aaPredicted RBP11.89□□□□□ -0.51
CSTF3-206ENST00000524827 ZNF443Q9Y2A4 671 aaPredicted RBP11.89□□□□□ -0.51
CSTF3-206ENST00000524827 WNK2Q9Y3S1 2297 aa11.89□□□□□ -0.51
CSTF3-206ENST00000524827 ZNF99A8MXY4 864 aaPredicted RBP11.88□□□□□ -0.51
CSTF3-206ENST00000524827 NCR1O76036 304 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 PNPP00491 289 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 GSNP06396 782 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 CREB1P16220 341 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 ETV4P43268 484 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 RPS5P46782 204 aaKnown RBP11.88□□□□□ -0.51
CSTF3-206ENST00000524827 SEC24CP53992 1094 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 NME5P56597 212 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 LMO4P61968 165 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 EGR4Q05215 589 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 MAD2L1BPQ15013 274 aaPredicted RBP11.88□□□□□ -0.51
CSTF3-206ENST00000524827 FAHD2BQ6P2I3 314 aaPredicted RBP11.88□□□□□ -0.51
CSTF3-206ENST00000524827 C1orf229Q6ZS94 237 aaPredicted RBP11.88□□□□□ -0.51
CSTF3-206ENST00000524827 ZNF621Q6ZSS3 439 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 LRRC34Q8IZ02 419 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 TMEM123Q8N131 208 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 CLIP4Q8N3C7 705 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 PIK3C3Q8NEB9 887 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 KIF18AQ8NI77 898 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 KTI12Q96EK9 354 aaPredicted RBP11.88□□□□□ -0.51
CSTF3-206ENST00000524827 FAHD2AQ96GK7 314 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 PKNOX2Q96KN3 472 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 OXGR1Q96P68 337 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 OR2M2Q96R28 347 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 B3GNT2Q9NY97 397 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 MYEF2Q9P2K5 600 aaKnown RBP11.88□□□□□ -0.51
CSTF3-206ENST00000524827 P2RX2Q9UBL9 471 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 LGALS13Q9UHV8 139 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 CHST2Q9Y4C5 530 aa11.88□□□□□ -0.51
CSTF3-206ENST00000524827 LOC105371242A0A075B767 164 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 TRAV20A0A0B4J274 112 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 PPIHO43447 177 aaKnown RBP11.87□□□□□ -0.51
CSTF3-206ENST00000524827 TRAF3IP2O43734 574 aaPredicted RBP11.87□□□□□ -0.51
CSTF3-206ENST00000524827 FZD7O75084 574 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 MYZAPP0CAP1 466 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 CD79AP11912 226 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 ZNF35P13682 527 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 LBPP18428 481 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 GLRXP35754 106 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 TMEM33P57088 247 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 UFM1P61960 85 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 C1DQ13901 141 aaKnown RBP11.87□□□□□ -0.51
CSTF3-206ENST00000524827 CHI3L2Q15782 390 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 GSG1Q2KHT4 349 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 PHYHD1Q5SRE7 291 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 REP15Q6BDI9 236 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 SERPINA11Q86U17 422 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 LRP11Q86VZ4 500 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 NUDCD3Q8IVD9 361 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 ZNF75AQ96N20 296 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 JMJD8Q96S16 334 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 G6PC2Q9NQR9 355 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 NOX1Q9Y5S8 564 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 TGP01266 2768 aa11.87□□□□□ -0.51
CSTF3-206ENST00000524827 TRRAPQ9Y4A5 3859 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 M0R082 166 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 M0R3G1 203 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 AIM2O14862 343 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 AKAP8O43823 692 aaKnown RBP11.86□□□□□ -0.51
CSTF3-206ENST00000524827 RP2O75695 350 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 KRT75O95678 551 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 AVPP01185 164 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 SERPINE1P05121 402 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 BCHEP06276 602 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 ETFAP13804 333 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 ZNF14P17017 642 aaPredicted RBP11.86□□□□□ -0.51
CSTF3-206ENST00000524827 IL12AP29459 219 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 LIMS1P48059 325 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 MVDP53602 400 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 CRISP3P54108 245 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 RPS23P62266 143 aaKnown RBP11.86□□□□□ -0.51
CSTF3-206ENST00000524827 MRPS11P82912 194 aaKnown RBP11.86□□□□□ -0.51
CSTF3-206ENST00000524827 HOXC5Q00444 222 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 PIGFQ07326 219 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 LARS2Q15031 903 aaKnown RBP11.86□□□□□ -0.51
CSTF3-206ENST00000524827 FXNQ16595 210 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 TRMT5Q32P41 509 aaKnown RBP11.86□□□□□ -0.51
CSTF3-206ENST00000524827 AWAT1Q58HT5 328 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 RPS26P11Q5JNZ5 115 aaPredicted RBP11.86□□□□□ -0.51
CSTF3-206ENST00000524827 TEX29Q8N6K0 151 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 ZNF417Q8TAU3 575 aa11.86□□□□□ -0.51
CSTF3-206ENST00000524827 OR52E6Q96RD3 313 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms