RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 ANKRD46Q86W74 232 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 LRRC25Q8N386 305 aaPredicted RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 CPSF7Q8N684 471 aaKnown RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 ZNF615Q8N8J6 731 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 C11orf65Q8NCR3 313 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 FDCSPQ8NFU4 85 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 TNIP2Q8NFZ5 429 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 OR4K14Q8NGD5 310 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 OR52R1Q8NGF1 315 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 OR8J2Q8NGG1 315 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 OR10V1Q8NGI7 309 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 OR5AK3PQ8NH89 298 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 GOT1L1Q8NHS2 421 aaPredicted RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 PSMA8Q8TAA3 256 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 FBXO30Q8TB52 745 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 ZNF675Q8TD23 568 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 DUSP19Q8WTR2 217 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 SNRNP27Q8WVK2 155 aaKnown RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 GTF2H4Q92759 462 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 NCLNQ969V3 563 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 ADIPOR1Q96A54 375 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 TESCQ96BS2 214 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 PPCDCQ96CD2 204 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 MTERF3Q96E29 417 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 FAM120BQ96EK7 910 aaKnown RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 AURKBQ96GD4 344 aaPredicted RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 C16orf58Q96GQ5 468 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 RILPQ96NA2 401 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 DGAT2Q96PD7 388 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 SLC39A3Q9BRY0 314 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 CENPKQ9BS16 269 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 NUDT9Q9BW91 350 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 ITPAQ9BY32 194 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 KRTAP4-4Q9BYR3 166 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 DPY30Q9C005 99 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 ROGDIQ9GZN7 287 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 PAIP1Q9H074 479 aaKnown RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 IKZF5Q9H5V7 419 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 CXorf21Q9HAI6 301 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 ZNF160Q9HCG1 818 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 ADAP2Q9NPF8 381 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 SLC35C2Q9NQQ7 365 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 BEX4Q9NWD9 120 aaPredicted RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 NMRK1Q9NWW6 199 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 MS4A12Q9NXJ0 267 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 SLC25A37Q9NYZ2 338 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 CCDC167Q9P0B6 97 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 FBXL4Q9UKA2 621 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 NXT1Q9UKK6 140 aaKnown RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 PPIEQ9UNP9 301 aaKnown RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 ERVK-19Q9WJR5 959 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 EIF3LQ9Y262 564 aaKnown RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 KCNE3Q9Y6H6 103 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 HRNRQ86YZ3 2850 aaPredicted RBP2.64□□□□□ -1.99
CSDE1-208ENST00000524652 FREM1Q5H8C1 2179 aa2.64□□□□□ -1.99
CSDE1-208ENST00000524652 INTS1Q8N201 2190 aaKnown RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 NSG1A0A0A6YYJ2 146 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 TRBV11-1A0A0K0K1C0 115 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 LOC100653049A0A140TA62 436 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 A0A1W2PRB8 838 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 A6NL46 340 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 WWP2O00308 870 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 PLOD2O00469 737 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 HMGN4O00479 90 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 CLDN4O14493 209 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 RRP8O43159 456 aaKnown RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 OR10H2O60403 315 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 PLOD3O60568 738 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 CEACAM4O75871 244 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 KRT34O76011 436 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 WISP2O76076 250 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 SORBS2O94875 1100 aaKnown RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 CPSF4O95639 269 aaKnown RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 FAM107AO95990 144 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 HPP00738 406 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 F10P00742 488 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 IGKV1D-16P01601 117 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 IGHEP01854 428 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 IFNA16P05015 189 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 ALPPP05187 535 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 HMGN2P05204 90 aaKnown RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 HEXAP06865 529 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 ABCB1P08183 1280 aaPredicted RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 CYC1P08574 325 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 CT45A8P0DMV1 189 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 CT45A9P0DMV2 189 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 COX4I1P13073 169 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 IDO1P14902 403 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 MYOD1P15172 320 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 CSNK2A2P19784 350 aaPredicted RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 NT5EP21589 574 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 TLX1P31314 330 aaPredicted RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 HPCAL1P37235 193 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 PTGDSP41222 190 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 GZMMP51124 257 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 KRTAP10-3P60369 221 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 SKP1P63208 163 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 EFNB1P98172 346 aa2.63□□□□□ -1.99
CSDE1-208ENST00000524652 ACTN3Q08043 901 aaPredicted RBP2.63□□□□□ -1.99
CSDE1-208ENST00000524652 STX4Q12846 297 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 102.9 ms