RNA–Protein interactions for RNA: ENST00000524330.1

VPS13B-212, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 218 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-212ENST00000524330 NPEPL1Q8NDH3 523 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 ATP6V1C2Q8NEY4 427 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 PRSS33Q8NF86 280 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 BBS1Q8NFJ9 593 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 OR6K6Q8NGW6 343 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 SNX33Q8WV41 574 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 KCNE4Q8WWG9 221 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 GATAD2BQ8WXI9 593 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 THAP4Q8WY91 577 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 THOC3Q96J01 351 aaKnown RBP9.02□□□□□ -0.97
VPS13B-212ENST00000524330 Q96M85 177 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 NMNAT3Q96T66 252 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 PIGQQ9BRB3 760 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 CHCHD6Q9BRQ6 235 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 MMP27Q9H306 513 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 MED20Q9H944 212 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 PLGRKTQ9HBL7 147 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 HMG20AQ9NP66 347 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 CHST11Q9NPF2 352 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 ASB6Q9NWX5 421 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 BABAM2Q9NXR7 383 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 TAS2R16Q9NYV7 291 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 CCDC59Q9P031 241 aaKnown RBP9.02□□□□□ -0.97
VPS13B-212ENST00000524330 CRNNQ9UBG3 495 aaPredicted RBP9.02□□□□□ -0.97
VPS13B-212ENST00000524330 B4GALT7Q9UBV7 327 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 ZNF346Q9UL40 294 aaKnown RBP9.02□□□□□ -0.97
VPS13B-212ENST00000524330 BOKQ9UMX3 212 aaPredicted RBP9.02□□□□□ -0.97
VPS13B-212ENST00000524330 TRAPPC4Q9Y296 219 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 FKBP7Q9Y680 259 aa9.02□□□□□ -0.97
VPS13B-212ENST00000524330 C2orf72A6NCS6 295 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 HSPB2A8KAH6 182 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 ARHGEF9O43307 516 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 EIF1BO60739 113 aaKnown RBP9.01□□□□□ -0.97
VPS13B-212ENST00000524330 F13BP05160 661 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 CELA2AP08217 269 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 LIFP15018 202 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 ITGA3P26006 1051 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 SRD5A2P31213 254 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 OR2B6P58173 313 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 DCTN2Q13561 401 aaKnown RBP9.01□□□□□ -0.97
VPS13B-212ENST00000524330 ZNF846Q147U1 533 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 SPCS2Q15005 226 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 HSPB2Q16082 182 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 PRAMEF20Q5VT98 475 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 LIPKQ5VXJ0 399 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 SLC6A19Q695T7 634 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 C19orf48Q6RUI8 117 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 IGF2-ASQ6U949 168 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 ARSKQ6UWY0 536 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 SHFQ7M4L6 423 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 SLC16A9Q7RTY1 509 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 FAM122BQ7Z309 247 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 PXKQ7Z7A4 578 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 UEVLDQ8IX04 471 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 PHC2Q8IXK0 858 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 SIRT6Q8N6T7 355 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 ZNF417Q8TAU3 575 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 SPRYD4Q8WW59 207 aaPredicted RBP9.01□□□□□ -0.97
VPS13B-212ENST00000524330 RASD2Q96D21 266 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 JSRP1Q96MG2 331 aaPredicted RBP9.01□□□□□ -0.97
VPS13B-212ENST00000524330 KCTD7Q96MP8 289 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 ZNF587Q96SQ5 575 aaPredicted RBP9.01□□□□□ -0.97
VPS13B-212ENST00000524330 PHOX2BQ99453 314 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 MESP1Q9BRJ9 268 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 UTP23Q9BRU9 249 aaKnown RBP9.01□□□□□ -0.97
VPS13B-212ENST00000524330 LRFN3Q9BTN0 628 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 ALG12Q9BV10 488 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 PTDSS2Q9BVG9 487 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 NMNAT2Q9BZQ4 307 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 WDR12Q9GZL7 423 aaKnown RBP9.01□□□□□ -0.97
VPS13B-212ENST00000524330 ADGRL4Q9HBW9 690 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 RPRD1BQ9NQG5 326 aaKnown RBP9.01□□□□□ -0.97
VPS13B-212ENST00000524330 STMN3Q9NZ72 180 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 RPH3AQ9Y2J0 694 aaPredicted RBP9.01□□□□□ -0.97
VPS13B-212ENST00000524330 MRPS18CQ9Y3D5 142 aaKnown RBP9.01□□□□□ -0.97
VPS13B-212ENST00000524330 ADAM18Q9Y3Q7 739 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 TRIOO75962 3097 aa9.01□□□□□ -0.97
VPS13B-212ENST00000524330 LOC101059948A0A1B0GTJ6 334 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 SPAARA0A1B0GVQ0 90 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 TRDV1A0A1B0GX56 115 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 A0A1W2PNV4 684 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 LIPT2A6NK58 231 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 FTCDNL1E5RQL4 147 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 J3QRE1 110 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 DNPH1O43598 174 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 TMCC2O75069 709 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 VAMP5O95183 116 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 APOL3O95236 402 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 PMS2P2O95744 297 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 MRPL3P09001 348 aaKnown RBP9□□□□□ -0.97
VPS13B-212ENST00000524330 CCL3P10147 92 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 LIPCP11150 499 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 CNR1P21554 472 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 NR4A1P22736 598 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 NCS1P62166 190 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 ATP1A4Q13733 1029 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 TOMM20Q15388 145 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 ACKR1Q16570 336 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 ZNF404Q494X3 552 aa9□□□□□ -0.97
VPS13B-212ENST00000524330 CCDC58Q4VC31 144 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms