RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 ATP23Q9Y6H3 246 aa14.19□□□□□ -0.14
CLN8-206ENST00000523237 NSD1Q96L73 2696 aaPredicted RBP14.18□□□□□ -0.14
CLN8-206ENST00000523237 RPL36A-HNRNPH2H7BZ11 118 aa14.18□□□□□ -0.14
CLN8-206ENST00000523237 FBP2O00757 339 aa14.18□□□□□ -0.14
CLN8-206ENST00000523237 PTNP21246 168 aa14.18□□□□□ -0.14
CLN8-206ENST00000523237 ACVR1BP36896 505 aa14.18□□□□□ -0.14
CLN8-206ENST00000523237 ARFIP2P53365 341 aa14.18□□□□□ -0.14
CLN8-206ENST00000523237 VMACQ2NL98 169 aa14.18□□□□□ -0.14
CLN8-206ENST00000523237 MMEL1Q495T6 779 aa14.18□□□□□ -0.14
CLN8-206ENST00000523237 ANKRD16Q6P6B7 361 aa14.18□□□□□ -0.14
CLN8-206ENST00000523237 B3GLCTQ6Y288 498 aa14.18□□□□□ -0.14
CLN8-206ENST00000523237 UEVLDQ8IX04 471 aa14.18□□□□□ -0.14
CLN8-206ENST00000523237 GPR137CQ8N3F9 429 aa14.18□□□□□ -0.14
CLN8-206ENST00000523237 SCAIQ8N9R8 606 aa14.18□□□□□ -0.14
CLN8-206ENST00000523237 PIK3C3Q8NEB9 887 aa14.18□□□□□ -0.14
CLN8-206ENST00000523237 GPR32P1Q8NGA4 272 aa14.18□□□□□ -0.14
CLN8-206ENST00000523237 OR6T1Q8NGN1 323 aa14.18□□□□□ -0.14
CLN8-206ENST00000523237 MAGEE2Q8TD90 523 aaPredicted RBP14.18□□□□□ -0.14
CLN8-206ENST00000523237 RASSF5Q8WWW0 418 aa14.18□□□□□ -0.14
CLN8-206ENST00000523237 BCL2L2Q92843 193 aaPredicted RBP14.18□□□□□ -0.14
CLN8-206ENST00000523237 SLC41A3Q96GZ6 507 aa14.18□□□□□ -0.14
CLN8-206ENST00000523237 MOV10Q9HCE1 1003 aaKnown RBP14.18□□□□□ -0.14
CLN8-206ENST00000523237 GDF2Q9UK05 429 aaPredicted RBP14.18□□□□□ -0.14
CLN8-206ENST00000523237 ARPC4-TTLL3A0A0A6YYG9 625 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 BBIP1A8MTZ0 92 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 ATP6V1G2-DDX39BF2Z307 99 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 MS4A18H0YCH9 400 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 TRAF3IP2O43734 574 aaPredicted RBP14.17□□□□□ -0.14
CLN8-206ENST00000523237 CHP2O43745 196 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 NDUFS7O75251 213 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 BGLAPP02818 100 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 VIMP08670 466 aaKnown RBP14.17□□□□□ -0.14
CLN8-206ENST00000523237 HOXB1P14653 301 aaPredicted RBP14.17□□□□□ -0.14
CLN8-206ENST00000523237 PMS2P3Q13401 168 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 MAPRE2Q15555 327 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 MS4A18Q3C1V0 323 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 COQ5Q5HYK3 327 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 C11orf71Q6IPW1 123 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 NANOGP8Q6NSW7 305 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 C10orf53Q8N6V4 93 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 SLC38A2Q96QD8 506 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 OR2M2Q96R28 347 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 KCNS3Q9BQ31 491 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 CACNG6Q9BXT2 260 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 NANOGQ9H9S0 305 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 MOKQ9UQ07 419 aa14.17□□□□□ -0.14
CLN8-206ENST00000523237 A0A096LPE4 126 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 A0A1W2PPZ6 126 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 CPSF4LA6NMK7 179 aaKnown RBP14.16□□□□□ -0.14
CLN8-206ENST00000523237 MT-ATP6P00846 226 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 NPPAP01160 153 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 BMP4P12644 408 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 APOBEC3AP31941 199 aaPredicted RBP14.16□□□□□ -0.14
CLN8-206ENST00000523237 GZMMP51124 257 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 POU3F1Q03052 451 aaPredicted RBP14.16□□□□□ -0.14
CLN8-206ENST00000523237 PUDPQ08623 228 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 KLF10Q13118 480 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 NPTX1Q15818 432 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 C3orf36Q3SXR2 165 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 ENTPD8Q5MY95 495 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 LINC00114Q6XXX2 140 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 OR8J3Q8NGG0 315 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 VANGL1Q8TAA9 524 aaPredicted RBP14.16□□□□□ -0.14
CLN8-206ENST00000523237 TAMM41Q96BW9 452 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 LRRC58Q96CX6 371 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 MOGAT1Q96PD6 335 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 ECSITQ9BQ95 431 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 CRLF2Q9HC73 371 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 GPR35Q9HC97 309 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 SAR1AQ9NR31 198 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 ZNF446Q9NWS9 450 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 MRPL39Q9NYK5 338 aaKnown RBP14.16□□□□□ -0.14
CLN8-206ENST00000523237 NOX1Q9Y5S8 564 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 ZANQ9Y493 2812 aa14.16□□□□□ -0.14
CLN8-206ENST00000523237 IGHV1-18A0A0C4DH31 117 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 TRAPPC13A5PLN9 417 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 RNF223E7ERA6 249 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 FXYD1O00168 92 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 MRASO14807 208 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 SSX4O60224 188 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 HPRP00739 348 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 CRYAAP02489 173 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 HLA-DOBP13765 273 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 CD247P20963 164 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 NUDT6P53370 316 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 ARF1P84077 181 aaKnown RBP14.15□□□□□ -0.14
CLN8-206ENST00000523237 CHRNB3Q05901 458 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 SF3A3Q12874 501 aaKnown RBP eCLIP14.15□□□□□ -0.14
CLN8-206ENST00000523237 RAB35Q15286 201 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 CEACAM16Q2WEN9 425 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 HSP90B2PQ58FF3 399 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 RABL3Q5HYI8 236 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 REP15Q6BDI9 236 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 CGB2Q6NT52 195 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 TTC33Q6PID6 262 aaPredicted RBP14.15□□□□□ -0.14
CLN8-206ENST00000523237 CCDC80Q76M96 950 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 PXKQ7Z7A4 578 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 TMEM123Q8N131 208 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 ADAMTS16Q8TE57 1224 aa14.15□□□□□ -0.14
CLN8-206ENST00000523237 KATNB1Q9BVA0 655 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms