RNA–Protein interactions for RNA: ENST00000522720.1

PABPC1-221, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 4

Gene PABPC1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-221ENST00000522720 ALPK1Q96QP1 1244 aa14.4□□□□□ -0.1
PABPC1-221ENST00000522720 LINC00470Q9BZP3 86 aa14.4□□□□□ -0.1
PABPC1-221ENST00000522720 RIMS3Q9UJD0 308 aa14.4□□□□□ -0.1
PABPC1-221ENST00000522720 SLC25A15Q9Y619 301 aa14.4□□□□□ -0.1
PABPC1-221ENST00000522720 PLPP3O14495 311 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 TRAF3IP2O43734 574 aaPredicted RBP14.39□□□□□ -0.11
PABPC1-221ENST00000522720 CD3EP07766 207 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 IL1RL1Q01638 556 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 LGALS3BPQ08380 585 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 PUDPQ08623 228 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 PIN1Q13526 163 aaPredicted RBP14.39□□□□□ -0.11
PABPC1-221ENST00000522720 ZNF74Q16587 644 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 C1QTNF12Q5T7M4 302 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 ADAM5Q6NVV9 412 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 DEF8Q6ZN54 512 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 PXKQ7Z7A4 578 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 UEVLDQ8IX04 471 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 C17orf78Q8N4C9 275 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 WDR31Q8NA23 367 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 OR5J2Q8NH18 312 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 OR52N5Q8NH56 324 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 KCTD14Q9BQ13 255 aaPredicted RBP14.39□□□□□ -0.11
PABPC1-221ENST00000522720 SPAG4Q9NPE6 437 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 NPAP1Q9NZP6 1156 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 RNF115Q9Y4L5 304 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 NOX1Q9Y5S8 564 aa14.39□□□□□ -0.11
PABPC1-221ENST00000522720 ZNF587BE7ETH6 402 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 HS3ST1O14792 307 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 AKAP8O43823 692 aaKnown RBP14.38□□□□□ -0.11
PABPC1-221ENST00000522720 SLC43A1O75387 559 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 UPK3AO75631 287 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 CH25HO95992 272 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 THRBP10828 461 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 HLA-DOBP13765 273 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 RBM34P42696 430 aaKnown RBP14.38□□□□□ -0.11
PABPC1-221ENST00000522720 BSPH1Q075Z2 132 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 CBLL1Q75N03 491 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 LINGO2Q7L985 606 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 VTCN1Q7Z7D3 282 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 NKAIN4Q8IVV8 208 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 PIGTQ969N2 578 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 PIP5K1AQ99755 562 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 FKRPQ9H9S5 495 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 MEPEQ9NQ76 525 aaPredicted RBP14.38□□□□□ -0.11
PABPC1-221ENST00000522720 NANSQ9NR45 359 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 SLC17A5Q9NRA2 495 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 BEX4Q9NWD9 120 aaPredicted RBP14.38□□□□□ -0.11
PABPC1-221ENST00000522720 TAGLN3Q9UI15 199 aa14.38□□□□□ -0.11
PABPC1-221ENST00000522720 KPNA4O00629 521 aaPredicted RBP14.37□□□□□ -0.11
PABPC1-221ENST00000522720 RRP9O43818 475 aaKnown RBP14.37□□□□□ -0.11
PABPC1-221ENST00000522720 ZNF682O95780 498 aa14.37□□□□□ -0.11
PABPC1-221ENST00000522720 MT-ND1P03886 318 aa14.37□□□□□ -0.11
PABPC1-221ENST00000522720 CDH2P19022 906 aaPredicted RBP14.37□□□□□ -0.11
PABPC1-221ENST00000522720 ZP4Q12836 540 aa14.37□□□□□ -0.11
PABPC1-221ENST00000522720 TMEM123Q8N131 208 aa14.37□□□□□ -0.11
PABPC1-221ENST00000522720 LRRC17Q8N6Y2 441 aa14.37□□□□□ -0.11
PABPC1-221ENST00000522720 ZNF611Q8N823 705 aa14.37□□□□□ -0.11
PABPC1-221ENST00000522720 ANKK1Q8NFD2 765 aa14.37□□□□□ -0.11
PABPC1-221ENST00000522720 LILRB1Q8NHL6 650 aaPredicted RBP14.37□□□□□ -0.11
PABPC1-221ENST00000522720 AKAP1Q92667 903 aaKnown RBP eCLIP14.37□□□□□ -0.119e-8■■□□□ 13.6
PABPC1-221ENST00000522720 HS6ST2Q96MM7 605 aa14.37□□□□□ -0.11
PABPC1-221ENST00000522720 ALKBH3Q96Q83 286 aaPredicted RBP14.37□□□□□ -0.11
PABPC1-221ENST00000522720 OR2M2Q96R28 347 aa14.37□□□□□ -0.11
PABPC1-221ENST00000522720 ARL8BQ9NVJ2 186 aa14.37□□□□□ -0.11
PABPC1-221ENST00000522720 TAS2R5Q9NYW4 299 aa14.37□□□□□ -0.11
PABPC1-221ENST00000522720 ADA2Q9NZK5 511 aa14.37□□□□□ -0.11
PABPC1-221ENST00000522720 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.37□□□□□ -0.11
PABPC1-221ENST00000522720 ZNF229Q9UJW7 825 aa14.37□□□□□ -0.11
PABPC1-221ENST00000522720 A4GNTQ9UNA3 340 aa14.37□□□□□ -0.11
PABPC1-221ENST00000522720 AMDHD2Q9Y303 409 aa14.37□□□□□ -0.11
PABPC1-221ENST00000522720 USF3Q68DE3 2245 aa14.37□□□□□ -0.11
PABPC1-221ENST00000522720 A0A1W2PR80 420 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 RPL36A-HNRNPH2H7BZ11 118 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 CLOCKO15516 846 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 OR6A2O95222 327 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 SERPINA1P01009 418 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 IGF2P01344 180 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 HIST1H2ABP04908 130 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 IFNW1P05000 195 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 ASAH2BP0C7U1 165 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 ADORA3P0DMS8 318 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 NCK1P16333 377 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 AHCYP23526 432 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 ZNF83P51522 516 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 UGT2B15P54855 530 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 PRPS1P60891 318 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 ROR2Q01974 943 aaKnown RBP14.36□□□□□ -0.11
PABPC1-221ENST00000522720 POU3F1Q03052 451 aaPredicted RBP14.36□□□□□ -0.11
PABPC1-221ENST00000522720 ST3GAL3Q11203 375 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 HMBOX1Q6NT76 420 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 KLHL17Q6TDP4 642 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 HIST3H2AQ7L7L0 130 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 GPR137CQ8N3F9 429 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 PIK3C3Q8NEB9 887 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 TMEM239Q8WW34 195 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 IGFBPL1Q8WX77 278 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 GEMIN6Q8WXD5 167 aaKnown RBP14.36□□□□□ -0.11
PABPC1-221ENST00000522720 HIST1H2ACQ93077 130 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 TXNDC15Q96J42 360 aa14.36□□□□□ -0.11
PABPC1-221ENST00000522720 LRR1Q96L50 414 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms