RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 RPL4P36578 427 aaKnown RBP11.7□□□□□ -0.54
CPNE3-205ENST00000522240 PCYT1AP49585 367 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 P2RY4P51582 365 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 RPS3AP61247 264 aaKnown RBP11.7□□□□□ -0.54
CPNE3-205ENST00000522240 ISL1P61371 349 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 H3F3AP84243 136 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 IL5RAQ01344 420 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 MAD2L1BPQ15013 274 aaPredicted RBP11.7□□□□□ -0.54
CPNE3-205ENST00000522240 PDK3Q15120 406 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 PLEKHN1Q494U1 663 aaPredicted RBP11.7□□□□□ -0.54
CPNE3-205ENST00000522240 EMC4Q5J8M3 183 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 GPR139Q6DWJ6 353 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 VASNQ6EMK4 673 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 ACSM5Q6NUN0 579 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 ENTHD1Q8IYW4 607 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 OR8J1Q8NGP2 316 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 CPNE4Q96A23 557 aaPredicted RBP11.7□□□□□ -0.54
CPNE3-205ENST00000522240 NAA11Q9BSU3 229 aaPredicted RBP11.7□□□□□ -0.54
CPNE3-205ENST00000522240 ENKD1Q9H0I2 346 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 DEFB127Q9H1M4 99 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 FN3KQ9H479 309 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 EXO5Q9H790 373 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 TIGARQ9NQ88 270 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 CMC2Q9NRP2 79 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 INIPQ9NRY2 104 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 PNPLA3Q9NST1 481 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 TAS2R5Q9NYW4 299 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 SEC14L4Q9UDX3 406 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 IL20RAQ9UHF4 553 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 RASD1Q9Y272 281 aa11.7□□□□□ -0.54
CPNE3-205ENST00000522240 FREM3P0C091 2139 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 LOC102725191A0A1B0GVB3 256 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 RNF223E7ERA6 249 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 SURF4O15260 269 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 RNF13O43567 381 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 C1QL1O75973 258 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 AKR7A3O95154 331 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 VAMP5O95183 116 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 IFNGP01579 166 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 OPN1LWP04000 364 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 CPN1P15169 458 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 GABRB1P18505 474 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 SDHAP31040 664 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 STARP49675 285 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 AGFG1P52594 562 aaKnown RBP11.69□□□□□ -0.54
CPNE3-205ENST00000522240 CTXN1P60606 82 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 SNRPGP62308 76 aaKnown RBP11.69□□□□□ -0.54
CPNE3-205ENST00000522240 MYBPC1Q00872 1141 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 CD47Q08722 323 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 POU4F3Q15319 338 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 SWI5Q1ZZU3 235 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 NADK2Q4G0N4 442 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 TMEM201Q5SNT2 666 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 FAM205BPQ63HN1 556 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 ABLIM2Q6H8Q1 611 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 FAM180AQ6UWF9 173 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 FAM122BQ7Z309 247 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 PXKQ7Z7A4 578 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 UBQLNLQ8IYU4 475 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 Q8NA96 180 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 OR10D3Q8NH80 312 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 RHOXF1Q8NHV9 184 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 ERMAPQ96PL5 475 aaPredicted RBP11.69□□□□□ -0.54
CPNE3-205ENST00000522240 KATNB1Q9BVA0 655 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 SRXN1Q9BYN0 137 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 PRDM14Q9GZV8 571 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 ZNF71Q9NQZ8 489 aaPredicted RBP11.69□□□□□ -0.54
CPNE3-205ENST00000522240 SPRR3Q9UBC9 169 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 KLHL21Q9UJP4 597 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 RNF6Q9Y252 685 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 NOX1Q9Y5S8 564 aa11.69□□□□□ -0.54
CPNE3-205ENST00000522240 PIEZO2Q9H5I5 2752 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 A0A1W2PRG6 482 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 OR14I1A6ND48 311 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 RIIAD1A6NNX1 92 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 CXCL13O43927 109 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 ZNF3P17036 446 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 ENPP1P22413 925 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 NOS3P29474 1203 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 EIF1AXP47813 144 aaKnown RBP11.68□□□□□ -0.54
CPNE3-205ENST00000522240 DAP3P51398 398 aaKnown RBP11.68□□□□□ -0.54
CPNE3-205ENST00000522240 SUCLG1P53597 346 aaKnown RBP11.68□□□□□ -0.54
CPNE3-205ENST00000522240 CLDN15P56746 228 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 CARD18P57730 90 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 EFNB1P98172 346 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 SNAPC1Q16533 368 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 SLC25A30Q5SVS4 291 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 PTCHD4Q6ZW05 846 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 HDDC2Q7Z4H3 204 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 IGFN1Q86VF2 1251 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 PM20D2Q8IYS1 436 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 TMEM99Q8N816 258 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 TMEM163Q8TC26 289 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 SARAFQ96BY9 339 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 WBP1Q96G27 269 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 PLEKHA8Q96JA3 519 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 NR1H4Q96RI1 486 aaPredicted RBP11.68□□□□□ -0.54
CPNE3-205ENST00000522240 TXNIPQ9H3M7 391 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 ZNF226Q9NYT6 803 aa11.68□□□□□ -0.54
CPNE3-205ENST00000522240 TVP23BQ9NYZ1 205 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms