RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 CEP19Q96LK0 163 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 NPAS1Q99742 590 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 STRADBQ9C0K7 418 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 INIPQ9NRY2 104 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 VDAC3Q9Y277 283 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 WIF1Q9Y5W5 379 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 IGLV3-32A0A0A0MS00 114 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 FAM171A2A8MVW0 826 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 STK17BO94768 372 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 RENP00797 406 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 CELA2AP08217 269 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 CD59P13987 128 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 E2F1Q01094 437 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 ATP1A4Q13733 1029 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 INSL4Q14641 139 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 CDONQ4KMG0 1287 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 TP53I3Q53FA7 332 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 CENPSQ8N2Z9 138 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 EXPH5Q8NEV8 1989 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 NEIL3Q8TAT5 605 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 M1APQ8TC57 530 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 TSSK2Q96PF2 358 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 TTTY10Q9BZA0 68 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 KCNN2Q9H2S1 579 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 PLEKHB1Q9UF11 243 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 HRH3Q9Y5N1 445 aa16.7■□□□□ 0.26
TRAPPC9-210ENST00000521667 H7C1C5 153 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 ETV2O00321 342 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 CASKO14936 926 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 RGS5O15539 181 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 ITGA10O75578 1167 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 AHCYP23526 432 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 F8A1P23610 371 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 LCN6P62502 163 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 FOXF1Q12946 379 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 TRAM1Q15629 374 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 LYPD4Q6UWN0 246 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 OR2T4Q8NH00 348 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 SNX33Q8WV41 574 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 MRPL48Q96GC5 212 aaKnown RBP16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 COPS3Q9UNS2 423 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 COL27A1Q8IZC6 1860 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 PRR33A8MZF0 331 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 FTCDNL1E5RQL4 147 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 OR6A2O95222 327 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 TNFSF8P32971 234 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 CASP3P42574 277 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 ZNF41P51814 821 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 HSF2Q03933 536 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 SPEM2Q0P670 501 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 SLC6A19Q695T7 634 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 DMKNQ6E0U4 476 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 RPTNQ6XPR3 784 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 NAXDQ8IW45 347 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 OR11G2Q8NGC1 345 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 SRA1Q9HD15 236 aaKnown RBP16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 MRPL39Q9NYK5 338 aaKnown RBP16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 NCDNQ9UBB6 729 aa16.69■□□□□ 0.26
TRAPPC9-210ENST00000521667 CFAP54Q96N23 3096 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 PLPP3O14495 311 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 MAGEB3O15480 346 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 ARHGEF9O43307 516 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 ZNF208O43345 1280 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 UPK1BO75841 260 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 IGHEP01854 428 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 CD63P08962 238 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 GBX2P52951 348 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 SLC3A1Q07837 685 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 RAB11FIP2Q7L804 512 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 ZNF511Q8NB15 262 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 SUMF1Q8NBK3 374 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 ZNF417Q8TAU3 575 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 THAP4Q8WY91 577 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 PELI1Q96FA3 418 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 COX4I2Q96KJ9 171 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 ZNF587Q96SQ5 575 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 SLC30A2Q9BRI3 323 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 ZPBPQ9BS86 351 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 DAPK2Q9UIK4 370 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 ST6GALNAC2Q9UJ37 374 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 PADI1Q9ULC6 663 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 GRIP1Q9Y3R0 1128 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 CACNA1HO95180 2353 aa16.68■□□□□ 0.26
TRAPPC9-210ENST00000521667 SMIM30A4D0T7 59 aa16.67■□□□□ 0.26
TRAPPC9-210ENST00000521667 DCTN6O00399 190 aa16.67■□□□□ 0.26
TRAPPC9-210ENST00000521667 XKRYO14609 159 aa16.67■□□□□ 0.26
TRAPPC9-210ENST00000521667 TP53I11O14683 189 aa16.67■□□□□ 0.26
TRAPPC9-210ENST00000521667 MAGEB4O15481 346 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC9-210ENST00000521667 PLGP00747 810 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC9-210ENST00000521667 RPL27P61353 136 aaKnown RBP16.67■□□□□ 0.26
TRAPPC9-210ENST00000521667 ACKR1Q16570 336 aa16.67■□□□□ 0.26
TRAPPC9-210ENST00000521667 SLC25A53Q5H9E4 307 aa16.67■□□□□ 0.26
TRAPPC9-210ENST00000521667 SLC16A9Q7RTY1 509 aa16.67■□□□□ 0.26
TRAPPC9-210ENST00000521667 OR6V1Q8N148 313 aa16.67■□□□□ 0.26
TRAPPC9-210ENST00000521667 AP3S1Q92572 193 aa16.67■□□□□ 0.26
TRAPPC9-210ENST00000521667 RELTQ969Z4 430 aa16.67■□□□□ 0.26
TRAPPC9-210ENST00000521667 DDIT4LQ96D03 193 aa16.67■□□□□ 0.26
TRAPPC9-210ENST00000521667 MRGPRX4Q96LA9 322 aa16.67■□□□□ 0.26
TRAPPC9-210ENST00000521667 PGLYRP3Q96LB9 341 aa16.67■□□□□ 0.26
TRAPPC9-210ENST00000521667 WDFY2Q96P53 400 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms