RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 PGRMC2O15173 223 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 UBDO15205 165 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 ARHGEF9O43307 516 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 PLPP2O43688 288 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 TBX19O60806 448 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 CDC123O75794 336 aaPredicted RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 GPR75O95800 540 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 AIFM1O95831 613 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 LIPFP07098 398 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 H1F0P07305 194 aaKnown RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 IL3P08700 152 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 SLC35E2P0CK97 266 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 C8orf89P0DMQ9 161 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 TROVE2P10155 538 aaKnown RBP eCLIP2.83□□□□□ -1.968e-10■■■■■ 45.1
VPS13B-209ENST00000521559 PRKAR1AP10644 381 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 PRPS2P11908 318 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 ICAM2P13598 275 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 CPMP14384 443 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 SDC1P18827 310 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 TNNI3P19429 210 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 CSNK2A2P19784 350 aaPredicted RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 PRPS1L1P21108 318 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 PIK3R1P27986 724 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 OTX2P32243 289 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 ASMTP46597 345 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 CAPZA2P47755 286 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 MRPL19P49406 292 aaKnown RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 XKP51811 444 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 HNRNPFP52597 415 aaKnown RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 EFNA3P52797 238 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 AQP5P55064 265 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 DIO3P55073 304 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 UCNP55089 124 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 OR4D2P58180 307 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 RPS18P62269 152 aaKnown RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 ERVK-8P63133 956 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 RPL38P63173 70 aaKnown RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 GNGT1P63211 74 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 SIRPAP78324 504 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 IRX1P78414 480 aaPredicted RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 IGLV3-21P80748 117 aaPredicted RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 PPP2R2BQ00005 443 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 FOLH1Q04609 750 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 ZNF763Q0D2J5 394 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 CDC20Q12834 499 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 STX4Q12846 297 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 SERTAD2Q14140 314 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 HEPACAMQ14CZ8 416 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 NSDHLQ15738 373 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 SFT2D3Q587I9 215 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 METTL21CQ5VZV1 264 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 DHRS7BQ6IAN0 325 aaPredicted RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 OR52E8Q6IFG1 317 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 FAM53AQ6NSI3 398 aaPredicted RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 RPUSD3Q6P087 351 aaKnown RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 SLC48A1Q6P1K1 146 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 SHISA6Q6ZSJ9 500 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 NDUFAF7Q7L592 441 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 CPEB2Q7Z5Q1 589 aaKnown RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 ANKRD37Q7Z713 158 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 OR4N5Q8IXE1 308 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 RIMKLAQ8IXN7 391 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 FAM9CQ8IZT9 166 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 LIX1Q8N485 282 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 NATD1Q8N6N6 113 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 FNDC5Q8NAU1 212 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 OR11G2Q8NGC1 345 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 OR4K14Q8NGD5 310 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 STARD8Q92502 1023 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 TSLPQ969D9 159 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 UCN3Q969E3 161 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 PPCDCQ96CD2 204 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 THOC1Q96FV9 657 aaKnown RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 RBM18Q96H35 190 aaKnown RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 PPP1R36Q96LQ0 422 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 IMMP1LQ96LU5 166 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 FER1L6-AS2Q96M78 137 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 ZNF681Q96N22 645 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 CATSPER2Q96P56 530 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 TSSK3Q96PN8 268 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 OR52B2Q96RD2 323 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 CDRT15Q96T59 188 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 PELOQ9BRX2 385 aaKnown RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 C1orf50Q9BV19 199 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 EBPLQ9BY08 206 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 VN1R1Q9GZP7 353 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 REEP4Q9H6H4 257 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 KCNK13Q9HB14 408 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 ADAP2Q9NPF8 381 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 SDR39U1Q9NRG7 319 aaPredicted RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 FGFR1OP2Q9NVK5 253 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 AIG1Q9NVV5 245 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 TEX10Q9NXF1 929 aaPredicted RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 P4HTMQ9NXG6 502 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 C19orf25Q9UFG5 118 aaPredicted RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 BAIAP2L1Q9UHR4 511 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 ATP6V1HQ9UI12 483 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 B3GALT5Q9Y2C3 310 aa2.83□□□□□ -1.96
VPS13B-209ENST00000521559 POLR3HQ9Y535 204 aaPredicted RBP2.83□□□□□ -1.96
VPS13B-209ENST00000521559 MRPS18BQ9Y676 258 aaKnown RBP2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms