RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 FAM53CQ9NYF3 392 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 ADA2Q9NZK5 511 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 NPAP1Q9NZP6 1156 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 TAGLN3Q9UI15 199 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 SLC25A15Q9Y619 301 aa18.14■□□□□ 0.49
TRIM35-203ENST00000521253 DPRXA6NFQ7 191 aa18.13■□□□□ 0.49
TRIM35-203ENST00000521253 ZNF587BE7ETH6 402 aa18.13■□□□□ 0.49
TRIM35-203ENST00000521253 SERPINA1P01009 418 aa18.13■□□□□ 0.49
TRIM35-203ENST00000521253 CDH2P19022 906 aaPredicted RBP18.13■□□□□ 0.49
TRIM35-203ENST00000521253 POU3F1Q03052 451 aaPredicted RBP18.13■□□□□ 0.49
TRIM35-203ENST00000521253 BSPH1Q075Z2 132 aa18.13■□□□□ 0.49
TRIM35-203ENST00000521253 FOXD4Q12950 439 aaPredicted RBP18.13■□□□□ 0.49
TRIM35-203ENST00000521253 ABHD12BQ7Z5M8 362 aaPredicted RBP18.13■□□□□ 0.49
TRIM35-203ENST00000521253 LRRC17Q8N6Y2 441 aa18.13■□□□□ 0.49
TRIM35-203ENST00000521253 RNF148Q8N7C7 305 aa18.13■□□□□ 0.49
TRIM35-203ENST00000521253 WDR31Q8NA23 367 aa18.13■□□□□ 0.49
TRIM35-203ENST00000521253 FAM162AQ96A26 154 aa18.13■□□□□ 0.49
TRIM35-203ENST00000521253 LINC00470Q9BZP3 86 aa18.13■□□□□ 0.49
TRIM35-203ENST00000521253 FKRPQ9H9S5 495 aa18.13■□□□□ 0.49
TRIM35-203ENST00000521253 NANSQ9NR45 359 aa18.13■□□□□ 0.49
TRIM35-203ENST00000521253 EGFL7Q9UHF1 273 aa18.13■□□□□ 0.49
TRIM35-203ENST00000521253 A4GNTQ9UNA3 340 aa18.13■□□□□ 0.49
TRIM35-203ENST00000521253 RNF115Q9Y4L5 304 aa18.13■□□□□ 0.49
TRIM35-203ENST00000521253 SNX13Q9Y5W8 968 aa18.13■□□□□ 0.49
TRIM35-203ENST00000521253 CLOCKO15516 846 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 SLC43A1O75387 559 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 FAM107AO95990 144 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 CD3EP07766 207 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 ADORA3P0DMS8 318 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 THRBP10828 461 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 AHCYP23526 432 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 RBM34P42696 430 aaKnown RBP18.12■□□□□ 0.49
TRIM35-203ENST00000521253 UGT2B15P54855 530 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 DEFB113Q30KQ7 82 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 GKAP1Q5VSY0 366 aaPredicted RBP18.12■□□□□ 0.49
TRIM35-203ENST00000521253 NHLRC1Q6VVB1 395 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 SPNS3Q6ZMD2 512 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 PXKQ7Z7A4 578 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 C17orf78Q8N4C9 275 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 PFN4Q8NHR9 129 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 TMEM239Q8WW34 195 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 GEMIN6Q8WXD5 167 aaKnown RBP18.12■□□□□ 0.49
TRIM35-203ENST00000521253 HSH2DQ96JZ2 352 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 PRRC1Q96M27 445 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 ALPK1Q96QP1 1244 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 OR2M2Q96R28 347 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 CXXC4Q9H2H0 198 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 SLC17A5Q9NRA2 495 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 ZNF229Q9UJW7 825 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 NOX1Q9Y5S8 564 aa18.12■□□□□ 0.49
TRIM35-203ENST00000521253 ITPR3Q14573 2671 aa18.11■□□□□ 0.49
TRIM35-203ENST00000521253 AKAP8O43823 692 aaKnown RBP18.11■□□□□ 0.49
TRIM35-203ENST00000521253 MT-ND1P03886 318 aa18.11■□□□□ 0.49
TRIM35-203ENST00000521253 IFNW1P05000 195 aa18.11■□□□□ 0.49
TRIM35-203ENST00000521253 YAP1P46937 504 aaKnown RBP18.11■□□□□ 0.49
TRIM35-203ENST00000521253 SLC25A3Q00325 362 aa18.11■□□□□ 0.49
TRIM35-203ENST00000521253 IFI44LQ53G44 452 aa18.11■□□□□ 0.49
TRIM35-203ENST00000521253 C20orf204Q6ZNR8 217 aa18.11■□□□□ 0.49
TRIM35-203ENST00000521253 SLC46A3Q7Z3Q1 461 aa18.11■□□□□ 0.49
TRIM35-203ENST00000521253 PGAM4Q8N0Y7 254 aa18.11■□□□□ 0.49
TRIM35-203ENST00000521253 TMEM123Q8N131 208 aa18.11■□□□□ 0.49
TRIM35-203ENST00000521253 FITM2Q8N6M3 262 aa18.11■□□□□ 0.49
TRIM35-203ENST00000521253 FAM156AQ8NDB6 213 aa18.11■□□□□ 0.49
TRIM35-203ENST00000521253 TXNDC15Q96J42 360 aa18.11■□□□□ 0.49
TRIM35-203ENST00000521253 EMC6Q9BV81 110 aa18.11■□□□□ 0.49
TRIM35-203ENST00000521253 C20orf141Q9NUB4 165 aa18.11■□□□□ 0.49
TRIM35-203ENST00000521253 MED29Q9NX70 200 aa18.11■□□□□ 0.49
TRIM35-203ENST00000521253 TAS2R5Q9NYW4 299 aa18.11■□□□□ 0.49
TRIM35-203ENST00000521253 C11orf98E9PRG8 122 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 J3KTA2 159 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 SERPINI2O75830 405 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 OR6A2O95222 327 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 ASAH2BP0C7U1 165 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 UMPSP11172 480 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 FUT4P22083 530 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 ROR2Q01974 943 aaKnown RBP18.1■□□□□ 0.49
TRIM35-203ENST00000521253 ST3GAL3Q11203 375 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 HIKESHIQ53FT3 197 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 CARD17Q5XLA6 110 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 GLYATQ6IB77 296 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 HMBOX1Q6NT76 420 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 FKBP9P1Q75LS8 142 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 WDFY1Q8IWB7 410 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 GPR137CQ8N3F9 429 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 RBM15BQ8NDT2 890 aaKnown RBP18.1■□□□□ 0.49
TRIM35-203ENST00000521253 PIK3C3Q8NEB9 887 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 OR1K1Q8NGR3 316 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 LILRB1Q8NHL6 650 aaPredicted RBP18.1■□□□□ 0.49
TRIM35-203ENST00000521253 AKAP1Q92667 903 aaKnown RBP eCLIP18.1■□□□□ 0.49
TRIM35-203ENST00000521253 BOD1Q96IK1 185 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 F8P00451 2351 aa18.1■□□□□ 0.49
TRIM35-203ENST00000521253 PRRC2AP48634 2157 aaKnown RBP18.1■□□□□ 0.49
TRIM35-203ENST00000521253 TEP1Q99973 2627 aaKnown RBP18.09■□□□□ 0.49
TRIM35-203ENST00000521253 CADP27708 2225 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 SLC35F4A4IF30 521 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 RPL36A-HNRNPH2H7BZ11 118 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 HS3ST1O14792 307 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 FFAR1O14842 300 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 HIST1H2ABP04908 130 aa18.09■□□□□ 0.49
TRIM35-203ENST00000521253 HOXC12P31275 282 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms