RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 HAUS4Q9H6D7 363 aa3.25□□□□□ -1.89
VPS13B-208ENST00000521037 TAS2R3Q9NYW6 316 aa3.25□□□□□ -1.89
VPS13B-208ENST00000521037 ACTR3BQ9P1U1 418 aa3.25□□□□□ -1.89
VPS13B-208ENST00000521037 RNF14Q9UBS8 474 aa3.25□□□□□ -1.89
VPS13B-208ENST00000521037 CLEC4AQ9UMR7 237 aa3.25□□□□□ -1.89
VPS13B-208ENST00000521037 PROCRQ9UNN8 238 aa3.25□□□□□ -1.89
VPS13B-208ENST00000521037 MOKQ9UQ07 419 aa3.25□□□□□ -1.89
VPS13B-208ENST00000521037 RRP15Q9Y3B9 282 aaKnown RBP3.25□□□□□ -1.89
VPS13B-208ENST00000521037 ZNF175Q9Y473 711 aa3.25□□□□□ -1.89
VPS13B-208ENST00000521037 PLXNB1O43157 2135 aa3.25□□□□□ -1.89
VPS13B-208ENST00000521037 C17orf105B2RV13 164 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 B4DSR2 109 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 GOLGA8KD6RF30 607 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 LYNX1G3V0Z9 82 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 H0YL77 283 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 VCYO14598 125 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 SCAMP2O15127 329 aaKnown RBP3.24□□□□□ -1.89
VPS13B-208ENST00000521037 NDUFS4O43181 175 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 CTNSO60931 367 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 ICOSLGO75144 302 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 EEDO75530 441 aaKnown RBP3.24□□□□□ -1.89
VPS13B-208ENST00000521037 CLPXO76031 633 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 GOT2P00505 430 aaKnown RBP3.24□□□□□ -1.89
VPS13B-208ENST00000521037 RPN2P04844 631 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 MSMBP08118 114 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 OR56A5P0C7T3 313 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 MYZAPP0CAP1 466 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 NHLRC4P0CG21 123 aaPredicted RBP3.24□□□□□ -1.89
VPS13B-208ENST00000521037 LYNX1P0DP58 116 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 GZMAP12544 262 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 CDH1P12830 882 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 DDX5P17844 614 aaKnown RBP3.24□□□□□ -1.89
VPS13B-208ENST00000521037 S1PR1P21453 382 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 MYF6P23409 242 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 TIA1P31483 386 aaKnown RBP eCLIP3.24□□□□□ -1.89
VPS13B-208ENST00000521037 DCTDP32321 178 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 MTIF2P46199 727 aaKnown RBP3.24□□□□□ -1.89
VPS13B-208ENST00000521037 TBPL1P62380 186 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 HOXA4Q00056 320 aaPredicted RBP3.24□□□□□ -1.89
VPS13B-208ENST00000521037 ITGADQ13349 1161 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 DOC2AQ14183 400 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 PIGHQ14442 188 aaPredicted RBP3.24□□□□□ -1.89
VPS13B-208ENST00000521037 CASP8Q14790 479 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 PON3Q15166 354 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 ADPRMQ3LIE5 342 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 FAM98BQ52LJ0 330 aaKnown RBP3.24□□□□□ -1.89
VPS13B-208ENST00000521037 ALG10Q5BKT4 473 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 ALG10BQ5I7T1 473 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 ADNP2Q6IQ32 1131 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 EMBQ6PCB8 327 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 ANGPTL8Q6UXH0 198 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 NHLRC1Q6VVB1 395 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 MBOAT1Q6ZNC8 495 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 NUFIP2Q7Z417 695 aaKnown RBP3.24□□□□□ -1.89
VPS13B-208ENST00000521037 ADCK1Q86TW2 530 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 EXOC3L1Q86VI1 746 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 RCOR2Q8IZ40 523 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 ZCCHC24Q8N2G6 241 aaKnown RBP3.24□□□□□ -1.89
VPS13B-208ENST00000521037 PARP16Q8N5Y8 322 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 EIF1ADQ8N9N8 165 aaKnown RBP3.24□□□□□ -1.89
VPS13B-208ENST00000521037 SCCPDHQ8NBX0 429 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 NEK11Q8NG66 645 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 OR14A16Q8NHC5 309 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 CLDND2Q8NHS1 167 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 TMIGD2Q96BF3 282 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 MUS81Q96NY9 551 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 GAL3ST4Q96RP7 486 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 KRT12Q99456 494 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 KLHDC3Q9BQ90 382 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 CCDC77Q9BR77 488 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 SUCNR1Q9BXA5 334 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 RHBGQ9H310 441 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 PRTFDC1Q9NRG1 225 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 NINJ2Q9NZG7 142 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 C1RLQ9NZP8 487 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 TBK1Q9UHD2 729 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 MYO6Q9UM54 1294 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 MRPS18CQ9Y3D5 142 aaKnown RBP3.24□□□□□ -1.89
VPS13B-208ENST00000521037 ZNF337Q9Y3M9 751 aa3.24□□□□□ -1.89
VPS13B-208ENST00000521037 NPIPA5A0A0B4J1W7 369 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 A0A0B4J293 547 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 A0A0G2JN53 185 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 WI2-2373I1.2A0A1W2PRP0 233 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 TMEM129A0AVI4 362 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 SDR42E2A6NKP2 422 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 CCT8L1PA6NM43 557 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 NPIPA7E9PJI5 369 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 POC1B-GALNT4F8VUJ3 575 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 C3orf84H3BNL1 204 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 M0QZ24 198 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 PPP6CO00743 305 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 FGF17O60258 216 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 NOL3O60936 208 aaKnown RBP3.23□□□□□ -1.89
VPS13B-208ENST00000521037 LDB3O75112 727 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 NIPSNAP2O75323 286 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 NDUFB4O95168 129 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 FGFR1OPO95684 399 aaKnown RBP3.23□□□□□ -1.89
VPS13B-208ENST00000521037 OPN1MWP04001 364 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 RLN1P04808 185 aa3.23□□□□□ -1.89
VPS13B-208ENST00000521037 NPIPA8P0DM63 369 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms