RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 PLGRKTQ9HBL7 147 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 MRPL47Q9HD33 250 aaKnown RBP3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 INPP5EQ9NRR6 644 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 TRAF3IP3Q9Y228 551 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 VSIG4Q9Y279 399 aa3.85□□□□□ -1.79
HMGB1P46-201ENST00000520062 WRBO00258 174 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 CCL21O00585 134 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 AGPAT2O15120 278 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 DFNA5O60443 496 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 SRSF10O75494 262 aaKnown RBP3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 BBOX1O75936 387 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 ERLIN2O94905 339 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 ZNF24P17028 368 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 IL18Q14116 193 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 ATP6AP1Q15904 470 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 C9orf129Q5T035 196 aaKnown RBP3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 CASC10Q5T4H9 136 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 RSBN1Q5VWQ0 802 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 C1orf94Q6P1W5 598 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 TRIM40Q6P9F5 258 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 SASS6Q6UVJ0 657 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 SCD5Q86SK9 330 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 ZBED8Q8IZ13 594 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 ZNF564Q8TBZ8 553 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 SLC22A8Q8TCC7 542 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 ACMSDQ8TDX5 336 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 ACOT11Q8WXI4 607 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 SMARCD2Q92925 531 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 HSFY1Q96LI6 401 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 C11orf70Q9BRQ4 267 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 RIOK2Q9BVS4 552 aaKnown RBP3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 POLR2J2Q9GZM3 115 aaKnown RBP3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 POLR2J3Q9H1A7 115 aaKnown RBP3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 AIG1Q9NVV5 245 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 KIAA1257Q9ULG3 409 aa3.84□□□□□ -1.79
HMGB1P46-201ENST00000520062 IGKV3D-20A0A0C4DH25 116 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 GOSR2O14653 212 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 CASC3O15234 703 aaKnown RBP3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 CLOCKO15516 846 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 MGRN1O60291 552 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 OR2F2O95006 317 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 H6PDO95479 791 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 TCN1P20061 433 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 MERTKQ12866 999 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 ARFRP1Q13795 201 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 C1orf185Q5T7R7 199 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 SCARA5Q6ZMJ2 495 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 CCDC73Q6ZRK6 1079 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 C19orf35Q6ZS72 473 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 LUZP2Q86TE4 346 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 BBOF1Q8ND07 529 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 ANKRD9Q96BM1 317 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 C20orf24Q9BUV8 137 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 TMEM59Q9BXS4 323 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 RNF167Q9H6Y7 350 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 AUNIPQ9H7T9 357 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 GEMIN7Q9H840 131 aaKnown RBP3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 SLC25A22Q9H936 323 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 ANKRA2Q9H9E1 313 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 RPS10P5Q9NQ39 176 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 EXD2Q9NVH0 621 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 PITPNC1Q9UKF7 332 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 NAP1L2Q9ULW6 460 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 MMP17Q9ULZ9 603 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 USP47Q96K76 1375 aa3.83□□□□□ -1.8
HMGB1P46-201ENST00000520062 WDR19Q8NEZ3 1342 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 E7ENQ6 273 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 DLGAP1O14490 977 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 GABRR1P24046 479 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 COX7A1P24310 79 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 RRM2P31350 389 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 ATP5C1P36542 298 aaKnown RBP3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 RGRP47804 291 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 RAB9AP51151 201 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 UGT2B15P54855 530 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 TAS2R19P59542 299 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 TGFBR3Q03167 851 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 CHRNA6Q15825 494 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 SPINK14Q6IE38 97 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 CERS6Q6ZMG9 384 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 NIPA1Q7RTP0 329 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 TMEM135Q86UB9 458 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 MS4A15Q8N5U1 240 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 LINC00612Q8N6U2 182 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 ZNF557Q8N988 423 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 OR6C4Q8NGE1 309 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 AGR3Q8TD06 166 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 C16orf74Q96GX8 76 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 MAGEB18Q96M61 343 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 PANX1Q96RD7 426 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 TSG101Q99816 390 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 TMEM246Q9BRR3 403 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 PELOQ9BRX2 385 aaKnown RBP3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 NAT9Q9BTE0 207 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 ADAP2Q9NPF8 381 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 DDX18Q9NVP1 670 aaKnown RBP3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 QPCTLQ9NXS2 382 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 VANGL2Q9ULK5 521 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 NEUROG3Q9Y4Z2 214 aa3.82□□□□□ -1.8
HMGB1P46-201ENST00000520062 COL2A1P02458 1487 aaPredicted RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms